Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.81■□□□□ 0.28
S1PR3Q99500 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
S1PR3Q99500 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.81■□□□□ 0.28
S1PR3Q99500 KRT18P5-201ENST00000436075 1291 ntBASIC16.81■□□□□ 0.28
S1PR3Q99500 AL162430.1-201ENST00000480705 870 ntBASIC16.81■□□□□ 0.28
S1PR3Q99500 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC16.81■□□□□ 0.28
S1PR3Q99500 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.81■□□□□ 0.28
S1PR3Q99500 SLC7A5P2-201ENST00000553010 536 ntBASIC16.81■□□□□ 0.28
S1PR3Q99500 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC16.81■□□□□ 0.28
S1PR3Q99500 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 FP700111.2-201ENST00000619190 1892 ntBASIC16.81■□□□□ 0.28
S1PR3Q99500 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC16.81■□□□□ 0.28
S1PR3Q99500 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
S1PR3Q99500 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.81■□□□□ 0.28
S1PR3Q99500 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.81■□□□□ 0.28
S1PR3Q99500 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
S1PR3Q99500 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
S1PR3Q99500 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
S1PR3Q99500 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
S1PR3Q99500 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.8■□□□□ 0.28
S1PR3Q99500 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.8■□□□□ 0.28
S1PR3Q99500 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
S1PR3Q99500 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
S1PR3Q99500 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC16.8■□□□□ 0.28
S1PR3Q99500 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
S1PR3Q99500 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.8■□□□□ 0.28
S1PR3Q99500 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
S1PR3Q99500 AC116050.2-201ENST00000612102 1779 ntBASIC16.79■□□□□ 0.28
S1PR3Q99500 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
S1PR3Q99500 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.79■□□□□ 0.28
S1PR3Q99500 SLC7A5P1-201ENST00000568957 537 ntBASIC16.79■□□□□ 0.28
S1PR3Q99500 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 KRT18P61-201ENST00000585825 1298 ntBASIC16.79■□□□□ 0.28
S1PR3Q99500 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC16.79■□□□□ 0.28
S1PR3Q99500 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
S1PR3Q99500 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
S1PR3Q99500 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC16.79■□□□□ 0.28
S1PR3Q99500 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.79■□□□□ 0.28
S1PR3Q99500 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.79■□□□□ 0.28
S1PR3Q99500 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.78■□□□□ 0.28
S1PR3Q99500 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
S1PR3Q99500 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
S1PR3Q99500 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC16.78■□□□□ 0.28
S1PR3Q99500 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.78■□□□□ 0.28
S1PR3Q99500 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC16.78■□□□□ 0.28
S1PR3Q99500 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 GXYLT1P2-201ENST00000433312 1230 ntBASIC16.78■□□□□ 0.28
S1PR3Q99500 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC16.78■□□□□ 0.28
S1PR3Q99500 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
S1PR3Q99500 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.78■□□□□ 0.28
S1PR3Q99500 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.78■□□□□ 0.28
S1PR3Q99500 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
S1PR3Q99500 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
S1PR3Q99500 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
S1PR3Q99500 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
S1PR3Q99500 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC16.77■□□□□ 0.28
S1PR3Q99500 AC027702.1-201ENST00000563810 1770 ntBASIC16.77■□□□□ 0.28
S1PR3Q99500 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
S1PR3Q99500 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
S1PR3Q99500 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
S1PR3Q99500 AC020907.5-201ENST00000624372 1936 ntBASIC16.77■□□□□ 0.28
S1PR3Q99500 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms