Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.58■□□□□ 0.56
SPENQ96T58 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SPENQ96T58 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC18.58■□□□□ 0.56
SPENQ96T58 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.58■□□□□ 0.56
SPENQ96T58 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
SPENQ96T58 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPENQ96T58 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.57■□□□□ 0.56
SPENQ96T58 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPENQ96T58 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPENQ96T58 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPENQ96T58 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC18.57■□□□□ 0.56
SPENQ96T58 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC18.57■□□□□ 0.56
SPENQ96T58 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SPENQ96T58 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SPENQ96T58 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPENQ96T58 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SPENQ96T58 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.57■□□□□ 0.56
SPENQ96T58 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPENQ96T58 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SPENQ96T58 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPENQ96T58 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SPENQ96T58 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SPENQ96T58 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.56■□□□□ 0.56
SPENQ96T58 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 AC073508.3-201ENST00000619697 1419 ntBASIC18.56■□□□□ 0.56
SPENQ96T58 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
SPENQ96T58 AC007322.3-201ENST00000426526 701 ntBASIC18.56■□□□□ 0.56
SPENQ96T58 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC18.56■□□□□ 0.56
SPENQ96T58 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.56■□□□□ 0.56
SPENQ96T58 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.56■□□□□ 0.56
SPENQ96T58 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.56■□□□□ 0.56
SPENQ96T58 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 STK25-205ENST00000405883 1904 ntTSL 2 BASIC18.56■□□□□ 0.56
SPENQ96T58 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.56■□□□□ 0.56
SPENQ96T58 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.56■□□□□ 0.56
SPENQ96T58 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.56■□□□□ 0.56
SPENQ96T58 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPENQ96T58 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC18.55■□□□□ 0.56
SPENQ96T58 AC113410.3-201ENST00000623366 203 ntBASIC18.55■□□□□ 0.56
SPENQ96T58 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPENQ96T58 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC18.55■□□□□ 0.56
SPENQ96T58 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC18.55■□□□□ 0.56
SPENQ96T58 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPENQ96T58 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPENQ96T58 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC18.55■□□□□ 0.56
SPENQ96T58 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SPENQ96T58 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.55■□□□□ 0.56
SPENQ96T58 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.55■□□□□ 0.56
SPENQ96T58 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPENQ96T58 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.55■□□□□ 0.56
SPENQ96T58 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPENQ96T58 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPENQ96T58 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SPENQ96T58 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPENQ96T58 KRT8P9-201ENST00000558927 1449 ntBASIC18.54■□□□□ 0.56
SPENQ96T58 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPENQ96T58 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.54■□□□□ 0.56
SPENQ96T58 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC18.54■□□□□ 0.56
SPENQ96T58 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPENQ96T58 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SPENQ96T58 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SPENQ96T58 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC18.54■□□□□ 0.56
SPENQ96T58 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC18.54■□□□□ 0.56
SPENQ96T58 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SPENQ96T58 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPENQ96T58 REXO1L10P-201ENST00000615707 1290 ntBASIC18.54■□□□□ 0.56
SPENQ96T58 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.54■□□□□ 0.56
SPENQ96T58 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPENQ96T58 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPENQ96T58 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPENQ96T58 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.54■□□□□ 0.56
SPENQ96T58 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC18.54■□□□□ 0.56
SPENQ96T58 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SPENQ96T58 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SPENQ96T58 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
SPENQ96T58 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.54■□□□□ 0.56
SPENQ96T58 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SPENQ96T58 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.53■□□□□ 0.56
SPENQ96T58 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPENQ96T58 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPENQ96T58 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.53■□□□□ 0.56
SPENQ96T58 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.53■□□□□ 0.56
SPENQ96T58 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SPENQ96T58 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SPENQ96T58 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.53■□□□□ 0.56
SPENQ96T58 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.53■□□□□ 0.56
SPENQ96T58 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.53■□□□□ 0.56
SPENQ96T58 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC18.53■□□□□ 0.56
SPENQ96T58 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SPENQ96T58 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms