Protein–RNA interactions for Protein: Q96RV3

PCNX1, Pecanex-like protein 1, humanhuman

Predictions only

Length 2,341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1Q96RV3 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCNX1Q96RV3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 SERF2-207ENST00000409614 582 ntTSL 2 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 C2orf69P4-201ENST00000565394 541 ntBASIC18.07■□□□□ 0.48
PCNX1Q96RV3 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCNX1Q96RV3 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 RCN1P1-201ENST00000400413 996 ntBASIC18.06■□□□□ 0.48
PCNX1Q96RV3 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 KRT18P21-201ENST00000515767 1272 ntBASIC18.06■□□□□ 0.48
PCNX1Q96RV3 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 AL353708.3-201ENST00000610272 989 ntBASIC18.06■□□□□ 0.48
PCNX1Q96RV3 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PCNX1Q96RV3 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 NUDT16P1-203ENST00000513809 620 ntBASIC18.05■□□□□ 0.48
PCNX1Q96RV3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.05■□□□□ 0.48
PCNX1Q96RV3 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 KRASP1-201ENST00000407852 552 ntBASIC18.04■□□□□ 0.48
PCNX1Q96RV3 AC087499.1-201ENST00000418141 1075 ntBASIC18.04■□□□□ 0.48
PCNX1Q96RV3 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.04■□□□□ 0.48
PCNX1Q96RV3 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 GALC-202ENST00000393568 2054 ntTSL 2 BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 AC124283.5-201ENST00000624661 1809 ntBASIC18.03■□□□□ 0.48
PCNX1Q96RV3 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
PCNX1Q96RV3 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms