Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H4Q96RI1 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 LSM7-203ENST00000585409 512 ntTSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NR1H4Q96RI1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
NR1H4Q96RI1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 KRT8P33-201ENST00000508125 1423 ntBASIC19.19■□□□□ 0.66
NR1H4Q96RI1 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 LBX2-AS1-202ENST00000603175 2083 ntBASIC19.19■□□□□ 0.66
NR1H4Q96RI1 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 AC003102.1-202ENST00000563394 1796 ntBASIC19.19■□□□□ 0.66
NR1H4Q96RI1 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
NR1H4Q96RI1 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 AC093484.2-201ENST00000580996 2166 ntBASIC19.18■□□□□ 0.66
NR1H4Q96RI1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
NR1H4Q96RI1 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms