Protein–RNA interactions for Protein: Q96QV6

HIST1H2AA, Histone H2A type 1-A, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AAQ96QV6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 AC116050.2-201ENST00000612102 1779 ntBASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.65■□□□□ 0.42
HIST1H2AAQ96QV6 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
HIST1H2AAQ96QV6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.64■□□□□ 0.42
HIST1H2AAQ96QV6 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC17.64■□□□□ 0.42
HIST1H2AAQ96QV6 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
HIST1H2AAQ96QV6 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 AC007225.1-201ENST00000566331 1836 ntBASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 PLD4-205ENST00000553861 667 ntTSL 2 BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 FP700111.2-201ENST00000619190 1892 ntBASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
HIST1H2AAQ96QV6 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
HIST1H2AAQ96QV6 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 GXYLT1P2-201ENST00000433312 1230 ntBASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 AC243732.1-201ENST00000612648 864 ntBASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HIST1H2AAQ96QV6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 FEM1AP1-201ENST00000431297 1995 ntBASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.6■□□□□ 0.41
HIST1H2AAQ96QV6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms