Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 AC092368.3-202ENST00000574180 1591 ntBASIC16.6■□□□□ 0.25
ZNF48Q96MX3 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ZNF48Q96MX3 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 RPS2P4-201ENST00000476944 856 ntBASIC16.59■□□□□ 0.25
ZNF48Q96MX3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF48Q96MX3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.25
ZNF48Q96MX3 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC16.58■□□□□ 0.25
ZNF48Q96MX3 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.58■□□□□ 0.24
ZNF48Q96MX3 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 AL359736.2-201ENST00000621992 437 ntBASIC16.58■□□□□ 0.24
ZNF48Q96MX3 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
ZNF48Q96MX3 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 AC116050.2-201ENST00000612102 1779 ntBASIC16.57■□□□□ 0.24
ZNF48Q96MX3 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.57■□□□□ 0.24
ZNF48Q96MX3 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.57■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms