Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
SPG11Q96JI7 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPG11Q96JI7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPG11Q96JI7 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SPG11Q96JI7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 AC073508.3-201ENST00000619697 1419 ntBASIC17.38■□□□□ 0.37
SPG11Q96JI7 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.38■□□□□ 0.37
SPG11Q96JI7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SPG11Q96JI7 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPG11Q96JI7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPG11Q96JI7 AC005521.1-201ENST00000393351 872 ntBASIC17.37■□□□□ 0.37
SPG11Q96JI7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC17.37■□□□□ 0.37
SPG11Q96JI7 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC17.37■□□□□ 0.37
SPG11Q96JI7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.37■□□□□ 0.37
SPG11Q96JI7 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.37■□□□□ 0.37
SPG11Q96JI7 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPG11Q96JI7 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
SPG11Q96JI7 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPG11Q96JI7 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.37■□□□□ 0.37
SPG11Q96JI7 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC17.37■□□□□ 0.37
SPG11Q96JI7 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
SPG11Q96JI7 HES2-206ENST00000489730 730 ntTSL 2 BASIC17.37■□□□□ 0.37
SPG11Q96JI7 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
SPG11Q96JI7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.37■□□□□ 0.37
SPG11Q96JI7 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 UPK3BP1-201ENST00000428678 509 ntBASIC17.36■□□□□ 0.37
SPG11Q96JI7 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 RNF146-204ENST00000476956 884 ntTSL 2 BASIC17.36■□□□□ 0.37
SPG11Q96JI7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
SPG11Q96JI7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 AL390955.1-201ENST00000428694 934 ntBASIC17.35■□□□□ 0.37
SPG11Q96JI7 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 RMI2-205ENST00000576027 818 ntTSL 2 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
SPG11Q96JI7 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.35■□□□□ 0.37
SPG11Q96JI7 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
SPG11Q96JI7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms