Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PDLIM5Q96HC4 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 PGM5P4-201ENST00000421970 445 ntBASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PDLIM5Q96HC4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 CNN2P6-201ENST00000439038 900 ntBASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC19.97■□□□□ 0.79
PDLIM5Q96HC4 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 AC087633.2-202ENST00000565166 1439 ntBASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 AC016405.3-201ENST00000607710 860 ntBASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 AC100791.3-201ENST00000617619 330 ntBASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PDLIM5Q96HC4 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.79
PDLIM5Q96HC4 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 CYP21A1P-202ENST00000354927 1481 ntBASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 AC011767.1-201ENST00000617410 1153 ntBASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC19.95■□□□□ 0.78
PDLIM5Q96HC4 AC068338.2-201ENST00000563278 1430 ntBASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDLIM5Q96HC4 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms