Protein–RNA interactions for Protein: Q96FT9

IFT43, Intraflagellar transport protein 43 homolog, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43Q96FT9 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.96■□□□□ 0.95
IFT43Q96FT9 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
IFT43Q96FT9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
IFT43Q96FT9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.95■□□□□ 0.94
IFT43Q96FT9 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFT43Q96FT9 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
IFT43Q96FT9 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
IFT43Q96FT9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFT43Q96FT9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.95■□□□□ 0.94
IFT43Q96FT9 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFT43Q96FT9 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFT43Q96FT9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFT43Q96FT9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFT43Q96FT9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.95■□□□□ 0.94
IFT43Q96FT9 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFT43Q96FT9 CNN2P6-201ENST00000439038 900 ntBASIC20.95■□□□□ 0.94
IFT43Q96FT9 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.95■□□□□ 0.94
IFT43Q96FT9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.95■□□□□ 0.94
IFT43Q96FT9 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFT43Q96FT9 AC133552.2-202ENST00000575694 574 ntBASIC20.95■□□□□ 0.94
IFT43Q96FT9 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
IFT43Q96FT9 AC121338.2-201ENST00000622535 1744 ntBASIC20.95■□□□□ 0.94
IFT43Q96FT9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
IFT43Q96FT9 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IFT43Q96FT9 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
IFT43Q96FT9 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
IFT43Q96FT9 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
IFT43Q96FT9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
IFT43Q96FT9 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.94■□□□□ 0.94
IFT43Q96FT9 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.94■□□□□ 0.94
IFT43Q96FT9 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
IFT43Q96FT9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
IFT43Q96FT9 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.94■□□□□ 0.94
IFT43Q96FT9 AC013268.1-206ENST00000638368 961 ntBASIC20.94■□□□□ 0.94
IFT43Q96FT9 AC112229.1-201ENST00000639295 961 ntBASIC20.94■□□□□ 0.94
IFT43Q96FT9 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.94■□□□□ 0.94
IFT43Q96FT9 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
IFT43Q96FT9 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IFT43Q96FT9 RBM17P2-201ENST00000616397 1405 ntBASIC20.94■□□□□ 0.94
IFT43Q96FT9 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IFT43Q96FT9 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
IFT43Q96FT9 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
IFT43Q96FT9 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IFT43Q96FT9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IFT43Q96FT9 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
IFT43Q96FT9 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 GUSBP6-202ENST00000438529 1198 ntBASIC20.93■□□□□ 0.94
IFT43Q96FT9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 AC243732.1-201ENST00000612648 864 ntBASIC20.93■□□□□ 0.94
IFT43Q96FT9 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
IFT43Q96FT9 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
IFT43Q96FT9 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFT43Q96FT9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.92■□□□□ 0.94
IFT43Q96FT9 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IFT43Q96FT9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFT43Q96FT9 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IFT43Q96FT9 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
IFT43Q96FT9 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFT43Q96FT9 SLC29A4P1-201ENST00000398760 971 ntBASIC20.92■□□□□ 0.94
IFT43Q96FT9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.92■□□□□ 0.94
IFT43Q96FT9 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.92■□□□□ 0.94
IFT43Q96FT9 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IFT43Q96FT9 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.92■□□□□ 0.94
IFT43Q96FT9 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
IFT43Q96FT9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.92■□□□□ 0.94
IFT43Q96FT9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFT43Q96FT9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
IFT43Q96FT9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
IFT43Q96FT9 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.92■□□□□ 0.94
IFT43Q96FT9 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
IFT43Q96FT9 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
IFT43Q96FT9 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
IFT43Q96FT9 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
IFT43Q96FT9 TERF1P5-201ENST00000477545 1207 ntBASIC20.91■□□□□ 0.94
IFT43Q96FT9 AC007322.4-201ENST00000509611 723 ntBASIC20.91■□□□□ 0.94
IFT43Q96FT9 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
IFT43Q96FT9 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.91■□□□□ 0.94
IFT43Q96FT9 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
IFT43Q96FT9 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
IFT43Q96FT9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
IFT43Q96FT9 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.91■□□□□ 0.94
IFT43Q96FT9 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms