Protein–RNA interactions for Protein: Q96ES6

MFSD3, Major facilitator superfamily domain-containing protein 3, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MFSD3Q96ES6 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.53■□□□□ 0.88
MFSD3Q96ES6 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.52■□□□□ 0.88
MFSD3Q96ES6 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
MFSD3Q96ES6 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MFSD3Q96ES6 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
MFSD3Q96ES6 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 AC099778.1-201ENST00000568593 1911 ntBASIC20.51■□□□□ 0.87
MFSD3Q96ES6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
MFSD3Q96ES6 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 AC026271.2-201ENST00000428091 497 ntBASIC20.5■□□□□ 0.87
MFSD3Q96ES6 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.5■□□□□ 0.87
MFSD3Q96ES6 KRT18P5-201ENST00000436075 1291 ntBASIC20.5■□□□□ 0.87
MFSD3Q96ES6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
MFSD3Q96ES6 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
MFSD3Q96ES6 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MFSD3Q96ES6 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
MFSD3Q96ES6 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
MFSD3Q96ES6 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms