Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC18.45■□□□□ 0.54
SNRNP40Q96DI7 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 MOK-233ENST00000524214 1539 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 RCN1P1-201ENST00000400413 996 ntBASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 AC012306.2-201ENST00000609350 630 ntBASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SNRNP40Q96DI7 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
SNRNP40Q96DI7 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 AL356652.1-201ENST00000615962 565 ntBASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
SNRNP40Q96DI7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SNRNP40Q96DI7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
SNRNP40Q96DI7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms