Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRUB1Q8WWH5 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.68■□□□□ 0.58
TRUB1Q8WWH5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.68■□□□□ 0.58
TRUB1Q8WWH5 AC055733.4-201ENST00000638462 1354 ntBASIC18.68■□□□□ 0.58
TRUB1Q8WWH5 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 AC133561.4-201ENST00000566112 224 ntBASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRUB1Q8WWH5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRUB1Q8WWH5 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TRUB1Q8WWH5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
TRUB1Q8WWH5 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRUB1Q8WWH5 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
TRUB1Q8WWH5 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TRUB1Q8WWH5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TRUB1Q8WWH5 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.63■□□□□ 0.57
TRUB1Q8WWH5 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms