Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
SMIM4Q8WVI0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 TMEM179-206ENST00000616017 1645 ntBASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.43■□□□□ 0.38
SMIM4Q8WVI0 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 AC055733.4-201ENST00000638462 1354 ntBASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 AC093503.3-201ENST00000624917 2352 ntBASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 MIR6724-1-201ENST00000616420 92 ntBASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 MIR6724-2-201ENST00000616483 92 ntBASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 MIR6724-4-201ENST00000617390 92 ntBASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 MIR6724-3-201ENST00000622482 92 ntBASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SMIM4Q8WVI0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 TSPY9P-201ENST00000440215 945 ntBASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 TSPY11P-201ENST00000442607 1045 ntBASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SMIM4Q8WVI0 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SMIM4Q8WVI0 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms