Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
CFAP43Q8NDM7 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 AL353708.3-201ENST00000610272 989 ntBASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 PARN-205ENST00000539279 1557 ntTSL 2 BASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC32.2■■■□□ 2.74
CFAP43Q8NDM7 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CFAP43Q8NDM7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC32.19■■■□□ 2.74
CFAP43Q8NDM7 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC32.19■■■□□ 2.74
CFAP43Q8NDM7 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CFAP43Q8NDM7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC32.19■■■□□ 2.74
CFAP43Q8NDM7 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CFAP43Q8NDM7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC32.19■■■□□ 2.74
CFAP43Q8NDM7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 KRT18P68-201ENST00000392293 1000 ntBASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
CFAP43Q8NDM7 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
CFAP43Q8NDM7 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC32.17■■■□□ 2.74
CFAP43Q8NDM7 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
CFAP43Q8NDM7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC32.17■■■□□ 2.74
CFAP43Q8NDM7 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CFAP43Q8NDM7 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC32.17■■■□□ 2.74
CFAP43Q8NDM7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CFAP43Q8NDM7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC32.17■■■□□ 2.74
CFAP43Q8NDM7 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC32.17■■■□□ 2.74
CFAP43Q8NDM7 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
CFAP43Q8NDM7 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 AL023875.1-201ENST00000640777 796 ntBASIC32.15■■■□□ 2.74
CFAP43Q8NDM7 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC32.14■■■□□ 2.74
CFAP43Q8NDM7 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
CFAP43Q8NDM7 KRASP1-201ENST00000407852 552 ntBASIC32.14■■■□□ 2.74
CFAP43Q8NDM7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC32.14■■■□□ 2.74
CFAP43Q8NDM7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC32.14■■■□□ 2.74
CFAP43Q8NDM7 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC32.14■■■□□ 2.74
CFAP43Q8NDM7 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.73
CFAP43Q8NDM7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC32.13■■■□□ 2.73
CFAP43Q8NDM7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CFAP43Q8NDM7 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC32.13■■■□□ 2.73
CFAP43Q8NDM7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
CFAP43Q8NDM7 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CFAP43Q8NDM7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
CFAP43Q8NDM7 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC32.13■■■□□ 2.73
CFAP43Q8NDM7 AC110285.5-201ENST00000611501 352 ntBASIC32.13■■■□□ 2.73
CFAP43Q8NDM7 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
CFAP43Q8NDM7 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
CFAP43Q8NDM7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
CFAP43Q8NDM7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC32.12■■■□□ 2.73
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms