Protein–RNA interactions for Protein: Q8NA58

PNLDC1, Poly(A)-specific ribonuclease PNLDC1, humanhuman

Known RBP Predictions only

Length 520 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PNLDC1Q8NA58 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PNLDC1Q8NA58 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.78■□□□□ 0.44
PNLDC1Q8NA58 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PNLDC1Q8NA58 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
PNLDC1Q8NA58 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.78■□□□□ 0.44
PNLDC1Q8NA58 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PNLDC1Q8NA58 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 DUX4L2-201ENST00000561772 1275 ntBASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 AC053503.5-201ENST00000601508 636 ntBASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 DUX4L6-201ENST00000626483 1275 ntBASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 DUX4L1-201ENST00000627662 1275 ntBASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 DUX4L8-201ENST00000629013 1275 ntBASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 DUX4L3-201ENST00000630187 1275 ntBASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 DUX4L7-201ENST00000630678 1275 ntBASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 DUX4L5-201ENST00000630834 1275 ntBASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PNLDC1Q8NA58 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
PNLDC1Q8NA58 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC17.77■□□□□ 0.43
PNLDC1Q8NA58 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PNLDC1Q8NA58 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.77■□□□□ 0.43
PNLDC1Q8NA58 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 AC020907.5-201ENST00000624372 1936 ntBASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
PNLDC1Q8NA58 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 FP700111.2-201ENST00000619190 1892 ntBASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 AC027702.1-201ENST00000563810 1770 ntBASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 AC011484.1-201ENST00000377652 1995 ntBASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
PNLDC1Q8NA58 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
PNLDC1Q8NA58 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PNLDC1Q8NA58 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
PNLDC1Q8NA58 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PNLDC1Q8NA58 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
PNLDC1Q8NA58 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.74■□□□□ 0.43
PNLDC1Q8NA58 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
PNLDC1Q8NA58 GLI3-203ENST00000437480 451 ntTSL 2 BASIC17.74■□□□□ 0.43
PNLDC1Q8NA58 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.74■□□□□ 0.43
PNLDC1Q8NA58 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms