Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NANOGP1Q8N7R0 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
NANOGP1Q8N7R0 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NANOGP1Q8N7R0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NANOGP1Q8N7R0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NANOGP1Q8N7R0 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NANOGP1Q8N7R0 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NANOGP1Q8N7R0 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NANOGP1Q8N7R0 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 AC061975.6-201ENST00000579045 1553 ntBASIC18.17■□□□□ 0.5
NANOGP1Q8N7R0 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 H19-201ENST00000411754 1788 ntTSL 5 BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 TMEM179-206ENST00000616017 1645 ntBASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NANOGP1Q8N7R0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 OR2A1-AS1-204ENST00000470435 602 ntBASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.15■□□□□ 0.5
NANOGP1Q8N7R0 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
NANOGP1Q8N7R0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
NANOGP1Q8N7R0 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 EEF1DP3-203ENST00000566025 782 ntBASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 AC053503.5-201ENST00000601508 636 ntBASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 MIR2861-201ENST00000636310 90 ntBASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NANOGP1Q8N7R0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms