Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
CHPFQ8IZ52 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 AC087633.2-202ENST00000565166 1439 ntBASIC20.8■□□□□ 0.92
CHPFQ8IZ52 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 PGM5P4-201ENST00000421970 445 ntBASIC20.8■□□□□ 0.92
CHPFQ8IZ52 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.8■□□□□ 0.92
CHPFQ8IZ52 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 C2orf69P4-201ENST00000565394 541 ntBASIC20.8■□□□□ 0.92
CHPFQ8IZ52 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 AL359736.2-201ENST00000621992 437 ntBASIC20.8■□□□□ 0.92
CHPFQ8IZ52 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC20.8■□□□□ 0.92
CHPFQ8IZ52 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 UBE2SP1-201ENST00000450587 669 ntBASIC20.79■□□□□ 0.92
CHPFQ8IZ52 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 C1QBPP2-201ENST00000528754 825 ntBASIC20.79■□□□□ 0.92
CHPFQ8IZ52 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 USP36-216ENST00000589424 970 ntTSL 5 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 FAM197Y4-202ENST00000622692 608 ntBASIC20.79■□□□□ 0.92
CHPFQ8IZ52 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.79■□□□□ 0.92
CHPFQ8IZ52 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC20.78■□□□□ 0.92
CHPFQ8IZ52 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
CHPFQ8IZ52 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CHPFQ8IZ52 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
CHPFQ8IZ52 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.77■□□□□ 0.92
CHPFQ8IZ52 RPPH1-201ENST00000516869 333 ntBASIC20.77■□□□□ 0.92
CHPFQ8IZ52 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.77■□□□□ 0.92
CHPFQ8IZ52 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.77■□□□□ 0.92
CHPFQ8IZ52 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC20.77■□□□□ 0.92
CHPFQ8IZ52 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms