Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 AC006015.1-201ENST00000429970 570 ntBASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 KRT8P36-201ENST00000489121 1440 ntBASIC18.66■□□□□ 0.58
ZNF440Q8IYI8 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 AL121603.2-201ENST00000557373 2117 ntBASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 AL162430.1-201ENST00000480705 870 ntBASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
ZNF440Q8IYI8 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.58
ZNF440Q8IYI8 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
ZNF440Q8IYI8 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.64■□□□□ 0.58
ZNF440Q8IYI8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 UQCRFS1P1-201ENST00000435169 820 ntBASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
ZNF440Q8IYI8 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 BID-214ENST00000617586 542 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
ZNF440Q8IYI8 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 DUX4L16-201ENST00000555130 1264 ntBASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 AC011767.1-201ENST00000617410 1153 ntBASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 AC087633.2-202ENST00000565166 1439 ntBASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
ZNF440Q8IYI8 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms