Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
NPAS4Q8IUM7 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 LINC01023-201ENST00000606054 436 ntBASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
NPAS4Q8IUM7 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC22.02■■□□□ 1.11
NPAS4Q8IUM7 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC22.02■■□□□ 1.11
NPAS4Q8IUM7 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 RARRES2P10-201ENST00000564312 460 ntBASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
NPAS4Q8IUM7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPAS4Q8IUM7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC22■■□□□ 1.11
NPAS4Q8IUM7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
NPAS4Q8IUM7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPAS4Q8IUM7 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
NPAS4Q8IUM7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22■■□□□ 1.11
NPAS4Q8IUM7 FAM210CP-201ENST00000445714 574 ntBASIC22■■□□□ 1.11
NPAS4Q8IUM7 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC22■■□□□ 1.11
NPAS4Q8IUM7 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22■■□□□ 1.11
NPAS4Q8IUM7 MIR4785-201ENST00000585005 73 ntBASIC22■■□□□ 1.11
NPAS4Q8IUM7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
NPAS4Q8IUM7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC22■■□□□ 1.11
NPAS4Q8IUM7 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC22■■□□□ 1.11
NPAS4Q8IUM7 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
NPAS4Q8IUM7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC22■■□□□ 1.11
NPAS4Q8IUM7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC22■■□□□ 1.11
NPAS4Q8IUM7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
NPAS4Q8IUM7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 PRKY-204ENST00000533551 1019 ntBASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 AC113410.3-201ENST00000623366 203 ntBASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
NPAS4Q8IUM7 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 ECEL1P1-201ENST00000373592 1742 ntBASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
NPAS4Q8IUM7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
NPAS4Q8IUM7 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms