Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 AL031963.3-201ENST00000606441 850 ntBASIC25.89■■□□□ 1.74
COL23A1Q86Y22 AL356652.1-201ENST00000615962 565 ntBASIC25.89■■□□□ 1.74
COL23A1Q86Y22 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
COL23A1Q86Y22 AC010947.1-201ENST00000623454 693 ntBASIC25.89■■□□□ 1.74
COL23A1Q86Y22 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.89■■□□□ 1.73
COL23A1Q86Y22 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC25.89■■□□□ 1.73
COL23A1Q86Y22 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC25.89■■□□□ 1.73
COL23A1Q86Y22 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC25.89■■□□□ 1.73
COL23A1Q86Y22 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
COL23A1Q86Y22 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 NBPF21P-201ENST00000425093 1451 ntBASIC25.88■■□□□ 1.73
COL23A1Q86Y22 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 AL390955.1-201ENST00000428694 934 ntBASIC25.88■■□□□ 1.73
COL23A1Q86Y22 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 USF2-205ENST00000594064 1179 ntTSL 2 BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL23A1Q86Y22 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL23A1Q86Y22 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL23A1Q86Y22 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 PGM5P4-201ENST00000421970 445 ntBASIC25.85■■□□□ 1.73
COL23A1Q86Y22 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 KRT18P22-201ENST00000402024 1347 ntBASIC25.85■■□□□ 1.73
COL23A1Q86Y22 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC25.85■■□□□ 1.73
COL23A1Q86Y22 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 SLC25A3P1-201ENST00000443844 931 ntBASIC25.84■■□□□ 1.73
COL23A1Q86Y22 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 NAPSB-206ENST00000562112 1266 ntBASIC25.84■■□□□ 1.73
COL23A1Q86Y22 AC087388.1-201ENST00000571370 1112 ntBASIC25.84■■□□□ 1.73
COL23A1Q86Y22 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL23A1Q86Y22 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC25.83■■□□□ 1.73
COL23A1Q86Y22 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.83■■□□□ 1.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms