Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHFQ7M4L6 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHFQ7M4L6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC18.41■□□□□ 0.54
SHFQ7M4L6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC18.41■□□□□ 0.54
SHFQ7M4L6 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC18.41■□□□□ 0.54
SHFQ7M4L6 AC012414.1-201ENST00000556676 535 ntBASIC18.41■□□□□ 0.54
SHFQ7M4L6 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC18.41■□□□□ 0.54
SHFQ7M4L6 AC110285.6-201ENST00000617652 491 ntBASIC18.41■□□□□ 0.54
SHFQ7M4L6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC18.41■□□□□ 0.54
SHFQ7M4L6 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
SHFQ7M4L6 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.41■□□□□ 0.54
SHFQ7M4L6 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHFQ7M4L6 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SHFQ7M4L6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC18.41■□□□□ 0.54
SHFQ7M4L6 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
SHFQ7M4L6 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SHFQ7M4L6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHFQ7M4L6 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHFQ7M4L6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
SHFQ7M4L6 AC061975.6-201ENST00000579045 1553 ntBASIC18.4■□□□□ 0.54
SHFQ7M4L6 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHFQ7M4L6 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.4■□□□□ 0.54
SHFQ7M4L6 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC18.4■□□□□ 0.54
SHFQ7M4L6 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.4■□□□□ 0.54
SHFQ7M4L6 AL136967.2-201ENST00000623968 743 ntBASIC18.4■□□□□ 0.54
SHFQ7M4L6 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHFQ7M4L6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.4■□□□□ 0.54
SHFQ7M4L6 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHFQ7M4L6 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHFQ7M4L6 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.4■□□□□ 0.54
SHFQ7M4L6 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SHFQ7M4L6 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.4■□□□□ 0.54
SHFQ7M4L6 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.4■□□□□ 0.54
SHFQ7M4L6 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SHFQ7M4L6 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
SHFQ7M4L6 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC18.39■□□□□ 0.53
SHFQ7M4L6 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC18.39■□□□□ 0.53
SHFQ7M4L6 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC18.39■□□□□ 0.53
SHFQ7M4L6 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 EEF1DP3-203ENST00000566025 782 ntBASIC18.39■□□□□ 0.53
SHFQ7M4L6 AL354811.1-201ENST00000610286 706 ntBASIC18.39■□□□□ 0.53
SHFQ7M4L6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.39■□□□□ 0.53
SHFQ7M4L6 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SHFQ7M4L6 MFF-207ENST00000409565 1548 ntTSL 2 BASIC18.39■□□□□ 0.53
SHFQ7M4L6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 AP004607.4-201ENST00000530158 1459 ntBASIC18.38■□□□□ 0.53
SHFQ7M4L6 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SHFQ7M4L6 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC18.38■□□□□ 0.53
SHFQ7M4L6 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHFQ7M4L6 TCF3P1-201ENST00000423021 1937 ntBASIC18.37■□□□□ 0.53
SHFQ7M4L6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHFQ7M4L6 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHFQ7M4L6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHFQ7M4L6 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
SHFQ7M4L6 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SHFQ7M4L6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
SHFQ7M4L6 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms