Protein–RNA interactions for Protein: Q6P1Q0

LETMD1, LETM1 domain-containing protein 1, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1Q6P1Q0 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 AC007322.3-201ENST00000426526 701 ntBASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LETMD1Q6P1Q0 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
LETMD1Q6P1Q0 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LETMD1Q6P1Q0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LETMD1Q6P1Q0 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LETMD1Q6P1Q0 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.73■□□□□ 0.75
LETMD1Q6P1Q0 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LETMD1Q6P1Q0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LETMD1Q6P1Q0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LETMD1Q6P1Q0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LETMD1Q6P1Q0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.73■□□□□ 0.75
LETMD1Q6P1Q0 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 SMG8-203ENST00000578922 2178 ntBASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 MYCNOS-205ENST00000641950 531 ntBASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.72■□□□□ 0.75
LETMD1Q6P1Q0 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 NTF6G-201ENST00000591094 616 ntBASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.71■□□□□ 0.75
LETMD1Q6P1Q0 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
LETMD1Q6P1Q0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms