Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 MIR4281-201ENST00000580852 62 ntBASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 ZC3H14-219ENST00000556945 2075 ntTSL 5 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 AL162377.1-201ENST00000618844 1793 ntBASIC15.47■□□□□ 0.07
CDPF1Q6NVV7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 AC020907.5-201ENST00000624372 1936 ntBASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 FUS-210ENST00000568685 1785 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
CDPF1Q6NVV7 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDPF1Q6NVV7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC15.46■□□□□ 0.06
CDPF1Q6NVV7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
CDPF1Q6NVV7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC15.46■□□□□ 0.06
CDPF1Q6NVV7 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDPF1Q6NVV7 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDPF1Q6NVV7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDPF1Q6NVV7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 AC009053.2-201ENST00000563701 2365 ntBASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 DET1-207ENST00000564406 2315 ntTSL 2 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDPF1Q6NVV7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 MTDHP2-201ENST00000601468 714 ntBASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDPF1Q6NVV7 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms