Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 AC027702.1-201ENST00000563810 1770 ntBASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 GPX1P1-201ENST00000388829 606 ntBASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 SLC29A4P1-201ENST00000398760 971 ntBASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 TK2-208ENST00000545043 1120 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC16.54■□□□□ 0.24
CCDC144NLQ6NUI1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 ISCU-212ENST00000547005 795 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 MKRN4P-201ENST00000444706 1521 ntBASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 CYP21A1P-202ENST00000354927 1481 ntBASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 AC087633.2-202ENST00000565166 1439 ntBASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
CCDC144NLQ6NUI1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 PLK5-205ENST00000642079 1969 ntBASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 NCF1B-203ENST00000435988 1254 ntBASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 AC083906.2-201ENST00000511578 360 ntBASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
CCDC144NLQ6NUI1 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC144NLQ6NUI1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC144NLQ6NUI1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
CCDC144NLQ6NUI1 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC16.52■□□□□ 0.23
CCDC144NLQ6NUI1 AC010980.2-201ENST00000587099 1412 ntBASIC16.52■□□□□ 0.23
CCDC144NLQ6NUI1 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CCDC144NLQ6NUI1 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
CCDC144NLQ6NUI1 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 AL589743.5-201ENST00000616611 1050 ntBASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 AL050303.2-201ENST00000619798 666 ntBASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC16.51■□□□□ 0.23
CCDC144NLQ6NUI1 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
CCDC144NLQ6NUI1 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CCDC144NLQ6NUI1 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms