Protein–RNA interactions for Protein: Q6NSI3

FAM53A, Protein FAM53A, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM53AQ6NSI3 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 AC091799.1-201ENST00000422823 811 ntBASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
FAM53AQ6NSI3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 KRT19P1-201ENST00000405746 1186 ntBASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 UQCRFS1P1-201ENST00000435169 820 ntBASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 KRT18P5-201ENST00000436075 1291 ntBASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC16.9■□□□□ 0.3
FAM53AQ6NSI3 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FAM53AQ6NSI3 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
FAM53AQ6NSI3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC16.89■□□□□ 0.3
FAM53AQ6NSI3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.89■□□□□ 0.3
FAM53AQ6NSI3 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
FAM53AQ6NSI3 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 KRT18P20-201ENST00000548986 1279 ntBASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 AC116050.2-201ENST00000612102 1779 ntBASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
FAM53AQ6NSI3 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 DBI-210ENST00000542275 757 ntTSL 5 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 MYCNOS-205ENST00000641950 531 ntBASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC16.88■□□□□ 0.29
FAM53AQ6NSI3 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms