Protein–RNA interactions for Protein: Q5THJ4

VPS13D, Vacuolar protein sorting-associated protein 13D, humanhuman

Predictions only

Length 4,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13DQ5THJ4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
VPS13DQ5THJ4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 AC113347.1-201ENST00000413321 391 ntBASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 DUT-205ENST00000558813 769 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 AC026471.5-201ENST00000615068 467 ntBASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
VPS13DQ5THJ4 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 KRT18P57-201ENST00000443599 1254 ntBASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 RHBDD2-201ENST00000006777 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
VPS13DQ5THJ4 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 AF186192.3-201ENST00000583427 947 ntBASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 AC010947.1-201ENST00000623454 693 ntBASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 AL356652.1-201ENST00000615962 565 ntBASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
VPS13DQ5THJ4 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 TREX2-204ENST00000370212 861 ntTSL 5 BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 CYP2D8P-201ENST00000433633 1490 ntBASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 FAM197Y1-201ENST00000421178 764 ntBASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 PALM-207ENST00000590161 2137 ntTSL 4 BASIC13.84□□□□□ -0.19
VPS13DQ5THJ4 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms