Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
RC3H1Q5TC82 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 AL445228.2-201ENST00000605589 952 ntBASIC25.96■■□□□ 1.75
RC3H1Q5TC82 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC25.96■■□□□ 1.75
RC3H1Q5TC82 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
RC3H1Q5TC82 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC25.95■■□□□ 1.75
RC3H1Q5TC82 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
RC3H1Q5TC82 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.75
RC3H1Q5TC82 HTR7P1-201ENST00000538670 1336 ntBASIC25.95■■□□□ 1.75
RC3H1Q5TC82 MFF-203ENST00000349901 1716 ntTSL 2 BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 TMPOP1-202ENST00000424642 1267 ntBASIC25.95■■□□□ 1.74
RC3H1Q5TC82 AL355355.2-201ENST00000442321 338 ntBASIC25.95■■□□□ 1.74
RC3H1Q5TC82 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC25.95■■□□□ 1.74
RC3H1Q5TC82 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 RPS15-203ENST00000586096 570 ntTSL 2 BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
RC3H1Q5TC82 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RC3H1Q5TC82 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
RC3H1Q5TC82 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC25.93■■□□□ 1.74
RC3H1Q5TC82 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
RC3H1Q5TC82 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC25.93■■□□□ 1.74
RC3H1Q5TC82 AL353807.1-201ENST00000427475 662 ntBASIC25.93■■□□□ 1.74
RC3H1Q5TC82 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC25.93■■□□□ 1.74
RC3H1Q5TC82 AC023632.3-201ENST00000521633 145 ntBASIC25.93■■□□□ 1.74
RC3H1Q5TC82 RN7SL850P-201ENST00000579959 291 ntBASIC25.93■■□□□ 1.74
RC3H1Q5TC82 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RC3H1Q5TC82 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
RC3H1Q5TC82 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC25.92■■□□□ 1.74
RC3H1Q5TC82 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RC3H1Q5TC82 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
RC3H1Q5TC82 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
RC3H1Q5TC82 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RC3H1Q5TC82 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
RC3H1Q5TC82 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC25.92■■□□□ 1.74
RC3H1Q5TC82 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC25.92■■□□□ 1.74
RC3H1Q5TC82 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC25.92■■□□□ 1.74
RC3H1Q5TC82 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
RC3H1Q5TC82 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 SRI-203ENST00000419179 1307 ntTSL 2 BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC25.9■■□□□ 1.74
RC3H1Q5TC82 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms