Protein–RNA interactions for Protein: Q5T2R2

PDSS1, Decaprenyl-diphosphate synthase subunit 1, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDSS1Q5T2R2 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PDSS1Q5T2R2 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 AC016405.3-201ENST00000607710 860 ntBASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PDSS1Q5T2R2 MKRN4P-201ENST00000444706 1521 ntBASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PDSS1Q5T2R2 FEM1AP4-201ENST00000443167 1987 ntBASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 PGM5P4-201ENST00000421970 445 ntBASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 AC011484.1-201ENST00000377652 1995 ntBASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC18.48■□□□□ 0.55
PDSS1Q5T2R2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.47■□□□□ 0.55
PDSS1Q5T2R2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 AC121338.2-201ENST00000622535 1744 ntBASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 MCRIP2P1-201ENST00000394346 511 ntBASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 HLA-L-209ENST00000420110 1011 ntBASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
PDSS1Q5T2R2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.54
PDSS1Q5T2R2 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
PDSS1Q5T2R2 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
PDSS1Q5T2R2 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.45■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms