Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PDCD4Q53EL6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDCD4Q53EL6 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDCD4Q53EL6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDCD4Q53EL6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
PDCD4Q53EL6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.58■□□□□ 0.73
PDCD4Q53EL6 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDCD4Q53EL6 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
PDCD4Q53EL6 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 MIR2861-201ENST00000636310 90 ntBASIC19.58■□□□□ 0.72
PDCD4Q53EL6 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
PDCD4Q53EL6 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 AC110285.6-201ENST00000617652 491 ntBASIC19.57■□□□□ 0.72
PDCD4Q53EL6 AL358852.1-201ENST00000623174 1268 ntBASIC19.57■□□□□ 0.72
PDCD4Q53EL6 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.57■□□□□ 0.72
PDCD4Q53EL6 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 SERP1-208ENST00000491660 830 ntTSL 2 BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
PDCD4Q53EL6 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 AC120498.10-201ENST00000621827 505 ntBASIC19.55■□□□□ 0.72
PDCD4Q53EL6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
PDCD4Q53EL6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
PDCD4Q53EL6 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
PDCD4Q53EL6 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms