Protein–RNA interactions for Protein: Q2NKX8

ERCC6L, DNA excision repair protein ERCC-6-like, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC6LQ2NKX8 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC6LQ2NKX8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC21.61■■□□□ 1.05
ERCC6LQ2NKX8 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
ERCC6LQ2NKX8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC6LQ2NKX8 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC21.6■■□□□ 1.05
ERCC6LQ2NKX8 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC6LQ2NKX8 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC6LQ2NKX8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.6■■□□□ 1.05
ERCC6LQ2NKX8 AL031848.2-201ENST00000607670 837 ntBASIC21.6■■□□□ 1.05
ERCC6LQ2NKX8 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC6LQ2NKX8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
ERCC6LQ2NKX8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC21.59■■□□□ 1.05
ERCC6LQ2NKX8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 pRNA.6-201ENST00000610482 90 ntBASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 pRNA.5-201ENST00000612139 90 ntBASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 pRNA.11-201ENST00000618423 90 ntBASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 pRNA.13-201ENST00000619112 90 ntBASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
ERCC6LQ2NKX8 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ERCC6LQ2NKX8 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ERCC6LQ2NKX8 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
ERCC6LQ2NKX8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
ERCC6LQ2NKX8 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
ERCC6LQ2NKX8 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.58■■□□□ 1.04
ERCC6LQ2NKX8 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
ERCC6LQ2NKX8 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
ERCC6LQ2NKX8 AC005332.8-201ENST00000622750 2735 ntBASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
ERCC6LQ2NKX8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 BX005040.4-201ENST00000637145 1518 ntBASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
ERCC6LQ2NKX8 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 AR-207ENST00000612010 3896 ntTSL 5 BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 AC006455.2-201ENST00000429931 906 ntBASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 AC011484.1-201ENST00000377652 1995 ntBASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
ERCC6LQ2NKX8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.54■■□□□ 1.04
ERCC6LQ2NKX8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC6LQ2NKX8 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
ERCC6LQ2NKX8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC21.54■■□□□ 1.04
ERCC6LQ2NKX8 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC21.54■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms