Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RSPO1Q2MKA7 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 IKBKGP1-201ENST00000612193 1073 ntBASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RSPO1Q2MKA7 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 AL391422.3-201ENST00000603791 2761 ntBASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 USP39-204ENST00000409766 2033 ntTSL 2 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 GAS2L1P2-201ENST00000436355 1356 ntBASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 BID-214ENST00000617586 542 ntTSL 5 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RSPO1Q2MKA7 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RSPO1Q2MKA7 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
RSPO1Q2MKA7 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
RSPO1Q2MKA7 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 CYP21A1P-202ENST00000354927 1481 ntBASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 RARRES2P4-201ENST00000514074 484 ntBASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.7■□□□□ 0.42
RSPO1Q2MKA7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 AC099778.1-201ENST00000568593 1911 ntBASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 AC004911.1-201ENST00000416316 871 ntBASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RSPO1Q2MKA7 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms