Protein–RNA interactions for Protein: Q12864

CDH17, Cadherin-17, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH17Q12864 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH17Q12864 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH17Q12864 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH17Q12864 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CDH17Q12864 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CDH17Q12864 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CDH17Q12864 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.63■□□□□ 0.89
CDH17Q12864 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CDH17Q12864 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 AL512408.1-201ENST00000569378 2000 ntBASIC20.62■□□□□ 0.89
CDH17Q12864 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC20.62■□□□□ 0.89
CDH17Q12864 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.62■□□□□ 0.89
CDH17Q12864 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 AL591742.1-201ENST00000604433 565 ntBASIC20.62■□□□□ 0.89
CDH17Q12864 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.62■□□□□ 0.89
CDH17Q12864 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
CDH17Q12864 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CDH17Q12864 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC20.61■□□□□ 0.89
CDH17Q12864 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDH17Q12864 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.61■□□□□ 0.89
CDH17Q12864 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.61■□□□□ 0.89
CDH17Q12864 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
CDH17Q12864 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 AL162377.1-201ENST00000618844 1793 ntBASIC20.61■□□□□ 0.89
CDH17Q12864 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
CDH17Q12864 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH17Q12864 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.61■□□□□ 0.89
CDH17Q12864 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC20.61■□□□□ 0.89
CDH17Q12864 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CDH17Q12864 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH17Q12864 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH17Q12864 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH17Q12864 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CDH17Q12864 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH17Q12864 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH17Q12864 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH17Q12864 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.6■□□□□ 0.89
CDH17Q12864 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.6■□□□□ 0.89
CDH17Q12864 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH17Q12864 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH17Q12864 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH17Q12864 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CDH17Q12864 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.6■□□□□ 0.89
CDH17Q12864 AC016769.1-201ENST00000409132 1010 ntBASIC20.6■□□□□ 0.89
CDH17Q12864 AC007322.4-201ENST00000509611 723 ntBASIC20.6■□□□□ 0.89
CDH17Q12864 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CDH17Q12864 AC013268.1-206ENST00000638368 961 ntBASIC20.6■□□□□ 0.89
CDH17Q12864 AC112229.1-201ENST00000639295 961 ntBASIC20.6■□□□□ 0.89
CDH17Q12864 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC20.6■□□□□ 0.89
CDH17Q12864 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH17Q12864 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH17Q12864 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.6■□□□□ 0.89
CDH17Q12864 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CDH17Q12864 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CDH17Q12864 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH17Q12864 SLC25A24-204ENST00000569674 2357 ntBASIC20.59■□□□□ 0.89
CDH17Q12864 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.59■□□□□ 0.89
CDH17Q12864 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH17Q12864 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH17Q12864 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.59■□□□□ 0.89
CDH17Q12864 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CDH17Q12864 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.59■□□□□ 0.89
CDH17Q12864 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.59■□□□□ 0.89
CDH17Q12864 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CDH17Q12864 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms