Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 COPE-203ENST00000351079 907 ntTSL 2 BASIC12.81□□□□□ -0.36
HSPG2P98160 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC12.81□□□□□ -0.36
HSPG2P98160 DBP-204ENST00000599385 709 ntTSL 3 BASIC12.81□□□□□ -0.36
HSPG2P98160 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HSPG2P98160 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC12.81□□□□□ -0.36
HSPG2P98160 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC12.81□□□□□ -0.36
HSPG2P98160 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HSPG2P98160 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
HSPG2P98160 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC12.81□□□□□ -0.36
HSPG2P98160 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC12.81□□□□□ -0.36
HSPG2P98160 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
HSPG2P98160 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC12.8□□□□□ -0.36
HSPG2P98160 C11orf96-202ENST00000528572 1834 ntBASIC12.8□□□□□ -0.36
HSPG2P98160 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC12.8□□□□□ -0.36
HSPG2P98160 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC12.8□□□□□ -0.36
HSPG2P98160 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC12.8□□□□□ -0.36
HSPG2P98160 CLEC4GP1-201ENST00000596555 870 ntBASIC12.8□□□□□ -0.36
HSPG2P98160 AC004263.2-201ENST00000617183 678 ntBASIC12.8□□□□□ -0.36
HSPG2P98160 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC12.8□□□□□ -0.36
HSPG2P98160 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
HSPG2P98160 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 SAPCD2P2-201ENST00000431719 1174 ntBASIC12.8□□□□□ -0.36
HSPG2P98160 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC12.8□□□□□ -0.36
HSPG2P98160 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC12.8□□□□□ -0.36
HSPG2P98160 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC12.8□□□□□ -0.36
HSPG2P98160 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
HSPG2P98160 AC117947.1-201ENST00000427448 529 ntBASIC12.79□□□□□ -0.36
HSPG2P98160 AC063952.2-201ENST00000498792 1227 ntBASIC12.79□□□□□ -0.36
HSPG2P98160 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC12.79□□□□□ -0.36
HSPG2P98160 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
HSPG2P98160 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
HSPG2P98160 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC12.79□□□□□ -0.36
HSPG2P98160 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC12.79□□□□□ -0.36
HSPG2P98160 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC12.79□□□□□ -0.36
HSPG2P98160 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC12.79□□□□□ -0.36
HSPG2P98160 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC12.79□□□□□ -0.36
HSPG2P98160 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC12.79□□□□□ -0.36
HSPG2P98160 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC12.79□□□□□ -0.36
HSPG2P98160 AL359075.1-203ENST00000462729 1002 ntBASIC12.79□□□□□ -0.36
HSPG2P98160 CD320-202ENST00000537716 1119 ntTSL 2 BASIC12.79□□□□□ -0.36
HSPG2P98160 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC12.79□□□□□ -0.36
HSPG2P98160 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC12.79□□□□□ -0.36
HSPG2P98160 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HSPG2P98160 ECEL1P2-202ENST00000465689 757 ntBASIC12.79□□□□□ -0.36
HSPG2P98160 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC12.79□□□□□ -0.36
HSPG2P98160 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC12.79□□□□□ -0.36
HSPG2P98160 AC139887.4-201ENST00000607877 719 ntBASIC12.79□□□□□ -0.36
HSPG2P98160 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC12.78□□□□□ -0.36
HSPG2P98160 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC12.78□□□□□ -0.36
HSPG2P98160 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HSPG2P98160 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC12.78□□□□□ -0.36
HSPG2P98160 MESTP1-201ENST00000404287 994 ntBASIC12.78□□□□□ -0.36
HSPG2P98160 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 SLC25A1P4-201ENST00000567977 778 ntBASIC12.78□□□□□ -0.36
HSPG2P98160 AC004264.1-201ENST00000608354 794 ntBASIC12.78□□□□□ -0.36
HSPG2P98160 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
HSPG2P98160 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC12.78□□□□□ -0.36
HSPG2P98160 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC12.78□□□□□ -0.36
HSPG2P98160 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC12.78□□□□□ -0.36
HSPG2P98160 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC12.78□□□□□ -0.36
HSPG2P98160 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HSPG2P98160 AK4P3-201ENST00000418260 669 ntBASIC12.78□□□□□ -0.36
HSPG2P98160 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms