Protein–RNA interactions for Protein: P83369

LSM11, U7 snRNA-associated Sm-like protein LSm11, humanhuman

Known RBP eCLIP

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM11P83369 ARHGAP4-207ENST00000420383 2817 ntTSL 216.06■□□□□ 0.163e-6■■■□□ 14.6
LSM11P83369 ARHGAP4-205ENST00000404127 3232 ntTSL 515.89■□□□□ 0.133e-6■■■□□ 14.6
LSM11P83369 ARHGAP4-219ENST00000470209 2889 ntTSL 515.73■□□□□ 0.113e-6■■■□□ 14.6
LSM11P83369 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.133e-6■■■□□ 14.6
LSM11P83369 ARHGAP4-203ENST00000370028 3372 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.143e-6■■■□□ 14.6
LSM11P83369 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.233e-6■■■□□ 14.6
LSM11P83369 SRSF5-205ENST00000553635 1412 ntTSL 2 BASIC16.02■□□□□ 0.165e-10■■■□□ 14.6
LSM11P83369 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.175e-10■■■□□ 14.6
LSM11P83369 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.455e-10■■■□□ 14.6
LSM11P83369 SRSF5-215ENST00000556587 1863 ntTSL 1 (best)11.74□□□□□ -0.535e-10■■■□□ 14.6
LSM11P83369 SRSF5-216ENST00000556647 644 ntTSL 211.02□□□□□ -0.655e-10■■■□□ 14.6
LSM11P83369 SRSF5-217ENST00000557154 1500 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.025e-10■■■□□ 14.6
LSM11P83369 SRSF5-207ENST00000554465 3044 ntTSL 1 (best)7.6□□□□□ -1.195e-10■■■□□ 14.6
LSM11P83369 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.378e-9■■■□□ 14.6
LSM11P83369 CLASRP-214ENST00000591904 506 ntTSL 516.28■□□□□ 0.28e-9■■■□□ 14.6
LSM11P83369 CLASRP-202ENST00000391952 2213 ntTSL 1 (best)14.77□□□□□ -0.058e-9■■■□□ 14.6
LSM11P83369 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.198e-9■■■□□ 14.6
LSM11P83369 CLASRP-206ENST00000585615 633 ntTSL 213.12□□□□□ -0.318e-9■■■□□ 14.6
LSM11P83369 CLASRP-210ENST00000588070 445 ntTSL 212.49□□□□□ -0.418e-9■■■□□ 14.6
LSM11P83369 HDAC10-212ENST00000477814 1784 ntTSL 218.89■□□□□ 0.612e-6■■■□□ 14.6
LSM11P83369 HDAC10-204ENST00000429374 1634 ntTSL 1 (best)17.49■□□□□ 0.392e-6■■■□□ 14.6
LSM11P83369 HDAC10-214ENST00000483222 2091 ntTSL 517.41■□□□□ 0.382e-6■■■□□ 14.6
LSM11P83369 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.332e-6■■■□□ 14.6
LSM11P83369 HDAC10-221ENST00000498366 2153 ntTSL 516.99■□□□□ 0.312e-6■■■□□ 14.6
LSM11P83369 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.81■□□□□ 0.282e-6■■■□□ 14.6
LSM11P83369 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.67■□□□□ 0.262e-6■■■□□ 14.6
LSM11P83369 HDAC10-203ENST00000415993 2375 ntTSL 1 (best)16.09■□□□□ 0.172e-6■■■□□ 14.6
LSM11P83369 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC15.87■□□□□ 0.132e-6■■■□□ 14.6
LSM11P83369 HDAC10-206ENST00000454936 1922 ntTSL 215.6■□□□□ 0.092e-6■■■□□ 14.6
LSM11P83369 CAMTA1-213ENST00000490738 538 ntTSL 223.57■■□□□ 1.366e-7■■■□□ 14.6
LSM11P83369 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.13■□□□□ 0.656e-7■■■□□ 14.6
LSM11P83369 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC18.58■□□□□ 0.566e-7■■■□□ 14.6
LSM11P83369 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC17.82■□□□□ 0.446e-7■■■□□ 14.6
LSM11P83369 CAMTA1-209ENST00000476163 863 ntTSL 216.71■□□□□ 0.276e-7■■■□□ 14.6
LSM11P83369 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.166e-7■■■□□ 14.6
LSM11P83369 CAMTA1-211ENST00000482934 743 ntTSL 311.36□□□□□ -0.596e-7■■■□□ 14.6
LSM11P83369 CAMTA1-202ENST00000461311 431 ntTSL 28.65□□□□□ -1.026e-7■■■□□ 14.6
LSM11P83369 CCNL1-218ENST00000476744 1029 ntTSL 212.46□□□□□ -0.413e-6■■■□□ 14.6
LSM11P83369 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.084e-8■■■□□ 14.6
LSM11P83369 TK2-218ENST00000567357 2266 ntTSL 1 (best)21.64■■□□□ 1.053e-8■■■□□ 14.6
LSM11P83369 TBRG1-205ENST00000473629 1634 ntTSL 516.98■□□□□ 0.313e-8■■■□□ 14.6
LSM11P83369 TBRG1-207ENST00000529543 2142 ntTSL 1 (best)15.91■□□□□ 0.143e-8■■■□□ 14.6
LSM11P83369 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.093e-8■■■□□ 14.6
LSM11P83369 TBRG1-208ENST00000530731 1571 ntTSL 1 (best)15.15■□□□□ 0.023e-8■■■□□ 14.6
LSM11P83369 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.023e-8■■■□□ 14.6
LSM11P83369 SKIV2L-211ENST00000485349 734 ntTSL 214.72□□□□□ -0.059e-12■■■□□ 14.6
LSM11P83369 AC010542.3-201ENST00000561527 586 ntTSL 414.7□□□□□ -0.063e-8■■■□□ 14.6
LSM11P83369 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.13e-8■■■□□ 14.6
LSM11P83369 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC14.28□□□□□ -0.123e-8■■■□□ 14.6
LSM11P83369 TK2-209ENST00000561905 822 ntTSL 514.19□□□□□ -0.143e-8■■■□□ 14.6
LSM11P83369 LINC00969-259ENST00000625776 911 ntTSL 514.04□□□□□ -0.163e-8■■■□□ 14.6
LSM11P83369 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.36□□□□□ -0.273e-8■■■□□ 14.6
LSM11P83369 LINC00969-308ENST00000628547 882 ntTSL 513.28□□□□□ -0.283e-8■■■□□ 14.6
LSM11P83369 LINC00969-335ENST00000631105 702 ntTSL 512.92□□□□□ -0.343e-8■■■□□ 14.6
LSM11P83369 LINC00969-217ENST00000451982 1161 ntTSL 512.92□□□□□ -0.343e-8■■■□□ 14.6
LSM11P83369 LINC00969-324ENST00000630243 955 ntTSL 512.73□□□□□ -0.373e-8■■■□□ 14.6
LSM11P83369 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.54□□□□□ -0.43e-8■■■□□ 14.6
LSM11P83369 LINC00969-254ENST00000625358 962 ntTSL 5 BASIC12.4□□□□□ -0.423e-8■■■□□ 14.6
LSM11P83369 LINC00969-313ENST00000628917 490 ntTSL 512.4□□□□□ -0.423e-8■■■□□ 14.6
LSM11P83369 LINC00969-244ENST00000602127 749 ntTSL 512.4□□□□□ -0.423e-8■■■□□ 14.6
LSM11P83369 LINC00969-272ENST00000626569 857 ntTSL 5 BASIC12.23□□□□□ -0.453e-8■■■□□ 14.6
LSM11P83369 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC12.18□□□□□ -0.463e-8■■■□□ 14.6
LSM11P83369 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC11.92□□□□□ -0.53e-8■■■□□ 14.6
LSM11P83369 LINC00969-322ENST00000630170 584 ntTSL 5 BASIC11.38□□□□□ -0.593e-8■■■□□ 14.6
LSM11P83369 LINC00969-285ENST00000627152 846 ntTSL 511.32□□□□□ -0.63e-8■■■□□ 14.6
LSM11P83369 TK2-205ENST00000527284 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.63e-8■■■□□ 14.6
LSM11P83369 LINC00969-263ENST00000626007 839 ntTSL 5 BASIC11.15□□□□□ -0.623e-8■■■□□ 14.6
LSM11P83369 TK2-206ENST00000527800 2687 ntTSL 1 (best) BASIC10.89□□□□□ -0.673e-8■■■□□ 14.6
LSM11P83369 LINC00969-213ENST00000445707 2363 ntTSL 2 BASIC10.78□□□□□ -0.683e-8■■■□□ 14.6
LSM11P83369 LINC00969-247ENST00000608737 956 ntTSL 5 BASIC10.64□□□□□ -0.713e-8■■■□□ 14.6
LSM11P83369 LINC00969-336ENST00000631189 1156 ntTSL 510.63□□□□□ -0.713e-8■■■□□ 14.6
LSM11P83369 LINC00969-320ENST00000629823 869 ntTSL 510.59□□□□□ -0.713e-8■■■□□ 14.6
LSM11P83369 TBRG1-201ENST00000284290 4468 ntTSL 1 (best)10.47□□□□□ -0.733e-8■■■□□ 14.6
LSM11P83369 LINC00969-236ENST00000599448 780 ntTSL 510.35□□□□□ -0.753e-8■■■□□ 14.6
LSM11P83369 LINC00969-342ENST00000631366 751 ntTSL 510.35□□□□□ -0.753e-8■■■□□ 14.6
LSM11P83369 LINC00969-225ENST00000594715 729 ntTSL 510.32□□□□□ -0.763e-8■■■□□ 14.6
LSM11P83369 TBRG1-203ENST00000441174 4004 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.823e-8■■■□□ 14.6
LSM11P83369 LINC00969-296ENST00000627718 510 ntTSL 59.78□□□□□ -0.843e-8■■■□□ 14.6
LSM11P83369 LINC00969-204ENST00000420851 868 ntTSL 5 BASIC9.78□□□□□ -0.843e-8■■■□□ 14.6
LSM11P83369 LINC00969-331ENST00000630863 954 ntTSL 59.74□□□□□ -0.853e-8■■■□□ 14.6
LSM11P83369 LINC00969-288ENST00000627363 731 ntTSL 59.7□□□□□ -0.863e-8■■■□□ 14.6
LSM11P83369 TBRG1-202ENST00000438907 842 ntTSL 1 (best)9.66□□□□□ -0.863e-8■■■□□ 14.6
LSM11P83369 LINC00969-230ENST00000597034 731 ntTSL 59.6□□□□□ -0.873e-8■■■□□ 14.6
LSM11P83369 AC010542.3-202ENST00000561728 701 ntAPPRIS P1 TSL 2 BASIC9.55□□□□□ -0.883e-8■■■□□ 14.6
LSM11P83369 LINC00969-293ENST00000627562 1184 ntTSL 59.19□□□□□ -0.943e-8■■■□□ 14.6
LSM11P83369 LINC00969-281ENST00000626969 745 ntTSL 59.11□□□□□ -0.953e-8■■■□□ 14.6
LSM11P83369 LINC00969-229ENST00000596584 863 ntTSL 5 BASIC9.09□□□□□ -0.953e-8■■■□□ 14.6
LSM11P83369 LINC00969-327ENST00000630417 918 ntTSL 59.01□□□□□ -0.973e-8■■■□□ 14.6
LSM11P83369 LINC00969-252ENST00000620737 702 ntTSL 58.88□□□□□ -0.993e-8■■■□□ 14.6
LSM11P83369 LINC00969-274ENST00000626617 1014 ntTSL 58.83□□□□□ -13e-8■■■□□ 14.6
LSM11P83369 TBRG1-209ENST00000531033 1809 ntTSL 28.6□□□□□ -1.033e-8■■■□□ 14.6
LSM11P83369 LINC00969-216ENST00000451228 604 ntTSL 38.53□□□□□ -1.043e-8■■■□□ 14.6
LSM11P83369 LINC00969-304ENST00000628301 772 ntTSL 58.31□□□□□ -1.083e-8■■■□□ 14.6
LSM11P83369 LINC00969-290ENST00000627502 874 ntTSL 58.01□□□□□ -1.133e-8■■■□□ 14.6
LSM11P83369 LINC00969-251ENST00000618708 606 ntTSL 57.75□□□□□ -1.173e-8■■■□□ 14.6
LSM11P83369 TK2-219ENST00000568170 422 ntTSL 37.23□□□□□ -1.253e-8■■■□□ 14.6
LSM11P83369 LINC00969-208ENST00000431767 486 ntTSL 56.95□□□□□ -1.33e-8■■■□□ 14.6
LSM11P83369 TBRG1-206ENST00000491010 2308 ntTSL 56.86□□□□□ -1.313e-8■■■□□ 14.6
LSM11P83369 LINC00969-215ENST00000451216 405 ntTSL 56.82□□□□□ -1.323e-8■■■□□ 14.6
LSM11P83369 LINC00969-317ENST00000629686 669 ntTSL 56.68□□□□□ -1.343e-8■■■□□ 14.6
Retrieved 100 of 11,495 protein–RNA pairs in 95.4 ms