RNA–Protein interactions for RNA: ENST00000284290.8

TBRG1-201, Transcript of transforming growth factor beta regulator 1, humanhuman

TSL 1 (best)

Gene TBRG1, Length 4,468 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TBRG1-201ENST00000284290 NISCHQ9Y2I1 1504 aa21.85■■□□□ 1.09
TBRG1-201ENST00000284290 DCAF8L2P0C7V8 631 aa20.94■□□□□ 0.94
TBRG1-201ENST00000284290 SHROOM4Q9ULL8 1493 aa19.86■□□□□ 0.77
TBRG1-201ENST00000284290 SUPT5HO00267 1087 aaKnown RBP19.78■□□□□ 0.76
TBRG1-201ENST00000284290 ABCC9O60706 1549 aa18.71■□□□□ 0.59
TBRG1-201ENST00000284290 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
TBRG1-201ENST00000284290 FAM9AQ8IZU1 332 aaPredicted RBP18.51■□□□□ 0.55
TBRG1-201ENST00000284290 TRIM41Q8WV44 630 aa18.38■□□□□ 0.53
TBRG1-201ENST00000284290 PABPN1Q86U42 306 aaKnown RBP eCLIP18.33■□□□□ 0.53
TBRG1-201ENST00000284290 CCDC180Q9P1Z9 1646 aa18.22■□□□□ 0.51
TBRG1-201ENST00000284290 ZCCHC6Q5VYS8 1495 aaKnown RBP18.19■□□□□ 0.5
TBRG1-201ENST00000284290 CHIC1Q5VXU3 224 aa18.13■□□□□ 0.49
TBRG1-201ENST00000284290 PCGF6Q9BYE7 350 aa18.1■□□□□ 0.49
TBRG1-201ENST00000284290 APLP2Q06481 763 aa18.04■□□□□ 0.48
TBRG1-201ENST00000284290 TTBK1Q5TCY1 1321 aaPredicted RBP18■□□□□ 0.47
TBRG1-201ENST00000284290 RANGAP1P46060 587 aaPredicted RBP17.96■□□□□ 0.46
TBRG1-201ENST00000284290 UBTFP17480 764 aaKnown RBP17.92■□□□□ 0.46
TBRG1-201ENST00000284290 LOC105371045A0A1W2PR82 267 aa17.89■□□□□ 0.45
TBRG1-201ENST00000284290 SCRIBQ14160 1630 aa17.82■□□□□ 0.44
TBRG1-201ENST00000284290 PPARGC1BQ86YN6 1023 aaKnown RBP17.69■□□□□ 0.42
TBRG1-201ENST00000284290 ATP1B4Q9UN42 357 aaPredicted RBP17.61■□□□□ 0.41
TBRG1-201ENST00000284290 TRIM26Q12899 539 aaPredicted RBP17.56■□□□□ 0.4
TBRG1-201ENST00000284290 CCER1Q8TC90 406 aaPredicted RBP17.55■□□□□ 0.4
TBRG1-201ENST00000284290 ZEB1P37275 1124 aaPredicted RBP17.49■□□□□ 0.39
TBRG1-201ENST00000284290 DCAF1Q9Y4B6 1507 aa17.48■□□□□ 0.39
TBRG1-201ENST00000284290 RB1CC1Q8TDY2 1594 aa17.47■□□□□ 0.39
TBRG1-201ENST00000284290 NACADO15069 1562 aa17.46■□□□□ 0.38
TBRG1-201ENST00000284290 RSF1Q96T23 1441 aaPredicted RBP17.36■□□□□ 0.37
TBRG1-201ENST00000284290 HRCP23327 699 aa17.31■□□□□ 0.36
TBRG1-201ENST00000284290 FBLN2P98095 1184 aa17.22■□□□□ 0.35
TBRG1-201ENST00000284290 CSRNP3Q8WYN3 585 aa17.21■□□□□ 0.35
TBRG1-201ENST00000284290 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.19■□□□□ 0.34
TBRG1-201ENST00000284290 HNRNPUL2Q1KMD3 747 aaKnown RBP17.19■□□□□ 0.34
TBRG1-201ENST00000284290 ITGAEP38570 1179 aa17.18■□□□□ 0.34
TBRG1-201ENST00000284290 CECR2Q9BXF3 1484 aa17.17■□□□□ 0.34
TBRG1-201ENST00000284290 MYO15BQ96JP2 1530 aa17.06■□□□□ 0.32
TBRG1-201ENST00000284290 BAZ1AQ9NRL2 1556 aaPredicted RBP17.04■□□□□ 0.32
TBRG1-201ENST00000284290 MYT1LQ9UL68 1186 aa17■□□□□ 0.31
TBRG1-201ENST00000284290 MROH2BQ7Z745 1585 aa16.96■□□□□ 0.31
TBRG1-201ENST00000284290 BAZ1BQ9UIG0 1483 aaKnown RBP16.93■□□□□ 0.3
TBRG1-201ENST00000284290 CENPBP07199 599 aaPredicted RBP16.91■□□□□ 0.3
TBRG1-201ENST00000284290 P3H3Q8IVL6 736 aa16.88■□□□□ 0.29
TBRG1-201ENST00000284290 FAM50AQ14320 339 aaKnown RBP16.88■□□□□ 0.29
TBRG1-201ENST00000284290 WRNQ14191 1432 aaPredicted RBP eCLIP16.82■□□□□ 0.28
TBRG1-201ENST00000284290 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
TBRG1-201ENST00000284290 PELP1Q8IZL8 1130 aaKnown RBP16.78■□□□□ 0.28
TBRG1-201ENST00000284290 WIZO95785 1651 aa16.73■□□□□ 0.27
TBRG1-201ENST00000284290 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
TBRG1-201ENST00000284290 EEA1Q15075 1411 aa16.72■□□□□ 0.27
TBRG1-201ENST00000284290 ARID3CA6NKF2 412 aa16.72■□□□□ 0.27
TBRG1-201ENST00000284290 CLIP1P30622 1438 aa16.65■□□□□ 0.26
TBRG1-201ENST00000284290 ERCC6Q03468 1493 aa16.63■□□□□ 0.25
TBRG1-201ENST00000284290 GOLGA3Q08378 1498 aa16.63■□□□□ 0.25
TBRG1-201ENST00000284290 CEP162Q5TB80 1403 aa16.63■□□□□ 0.25
TBRG1-201ENST00000284290 DIEXFQ68CQ4 756 aaKnown RBP16.62■□□□□ 0.25
TBRG1-201ENST00000284290 TRIM52Q96A61 297 aa16.61■□□□□ 0.25
TBRG1-201ENST00000284290 SMARCA2P51531 1590 aa16.6■□□□□ 0.25
TBRG1-201ENST00000284290 TOP2AP11388 1531 aaKnown RBP16.6■□□□□ 0.25
TBRG1-201ENST00000284290 NEUROD1Q13562 356 aa16.6■□□□□ 0.25
TBRG1-201ENST00000284290 CHMP7Q8WUX9 453 aaPredicted RBP16.6■□□□□ 0.25
TBRG1-201ENST00000284290 ABCC8Q09428 1581 aa16.6■□□□□ 0.25
TBRG1-201ENST00000284290 SOGA1O94964 1423 aa16.6■□□□□ 0.25
TBRG1-201ENST00000284290 SMARCA4P51532 1647 aa16.57■□□□□ 0.24
TBRG1-201ENST00000284290 TNIKQ9UKE5 1360 aa16.57■□□□□ 0.24
TBRG1-201ENST00000284290 KIF27Q86VH2 1401 aa16.56■□□□□ 0.24
TBRG1-201ENST00000284290 CEP164Q9UPV0 1460 aa16.54■□□□□ 0.24
TBRG1-201ENST00000284290 POLR3GLQ9BT43 218 aa16.53■□□□□ 0.24
TBRG1-201ENST00000284290 ATAD2BQ9ULI0 1458 aa16.52■□□□□ 0.24
TBRG1-201ENST00000284290 NPM1P06748 294 aaKnown RBP eCLIP16.5■□□□□ 0.23
TBRG1-201ENST00000284290 CDK11AQ9UQ88 783 aaPredicted RBP16.47■□□□□ 0.23
TBRG1-201ENST00000284290 ZNF777Q9ULD5 760 aaPredicted RBP16.43■□□□□ 0.22
TBRG1-201ENST00000284290 ZNF316A6NFI3 1004 aaPredicted RBP16.43■□□□□ 0.22
TBRG1-201ENST00000284290 CNGB1Q14028 1251 aaPredicted RBP16.42■□□□□ 0.22
TBRG1-201ENST00000284290 NEFLP07196 543 aa16.42■□□□□ 0.22
TBRG1-201ENST00000284290 CUX2O14529 1486 aa16.39■□□□□ 0.21
TBRG1-201ENST00000284290 MTUS2Q5JR59 1369 aa16.37■□□□□ 0.21
TBRG1-201ENST00000284290 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
TBRG1-201ENST00000284290 CADPSQ9ULU8 1353 aa16.33■□□□□ 0.2
TBRG1-201ENST00000284290 ZNF326Q5BKZ1 582 aaKnown RBP16.32■□□□□ 0.2
TBRG1-201ENST00000284290 CHIC2Q9UKJ5 165 aa16.3■□□□□ 0.2
TBRG1-201ENST00000284290 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.19
TBRG1-201ENST00000284290 PDS5BQ9NTI5 1447 aa16.26■□□□□ 0.19
TBRG1-201ENST00000284290 RUSC2Q8N2Y8 1516 aa16.25■□□□□ 0.19
TBRG1-201ENST00000284290 DNAJC5BQ9UF47 199 aa16.23■□□□□ 0.19
TBRG1-201ENST00000284290 TDRD9Q8NDG6 1382 aaKnown RBP16.2■□□□□ 0.18
TBRG1-201ENST00000284290 VPS8Q8N3P4 1428 aa16.2■□□□□ 0.18
TBRG1-201ENST00000284290 KCNH8Q96L42 1107 aa16.2■□□□□ 0.18
TBRG1-201ENST00000284290 TONSLQ96HA7 1378 aa16.19■□□□□ 0.18
TBRG1-201ENST00000284290 NCAPD3P42695 1498 aa16.18■□□□□ 0.18
TBRG1-201ENST00000284290 EIF4G1Q04637 1599 aaKnown RBP16.18■□□□□ 0.18
TBRG1-201ENST00000284290 ANP32CO43423 234 aa16.17■□□□□ 0.18
TBRG1-201ENST00000284290 RAPGEF2Q9Y4G8 1499 aa16.15■□□□□ 0.18
TBRG1-201ENST00000284290 TRHP20396 242 aaPredicted RBP16.15■□□□□ 0.18
TBRG1-201ENST00000284290 FHAD1B1AJZ9 1412 aa16.14■□□□□ 0.17
TBRG1-201ENST00000284290 ESF1Q9H501 851 aaKnown RBP16.14■□□□□ 0.17
TBRG1-201ENST00000284290 RRP7BPQ9NSQ0 103 aa16.14■□□□□ 0.17
TBRG1-201ENST00000284290 TSPY4P0CV99 314 aa16.11■□□□□ 0.17
TBRG1-201ENST00000284290 TSPY10P0CW01 314 aa16.11■□□□□ 0.17
TBRG1-201ENST00000284290 KANK4Q5T7N3 995 aaPredicted RBP16.11■□□□□ 0.17
TBRG1-201ENST00000284290 SLC4A1APQ9BWU0 796 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms