Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC21.06■□□□□ 0.96
EIF3EP60228 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
EIF3EP60228 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
EIF3EP60228 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC21.06■□□□□ 0.96
EIF3EP60228 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
EIF3EP60228 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
EIF3EP60228 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
EIF3EP60228 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
EIF3EP60228 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC21.05■□□□□ 0.96
EIF3EP60228 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
EIF3EP60228 AC007322.3-201ENST00000426526 701 ntBASIC21.05■□□□□ 0.96
EIF3EP60228 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.05■□□□□ 0.96
EIF3EP60228 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC21.05■□□□□ 0.96
EIF3EP60228 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
EIF3EP60228 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.05■□□□□ 0.96
EIF3EP60228 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
EIF3EP60228 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC21.04■□□□□ 0.96
EIF3EP60228 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC21.04■□□□□ 0.96
EIF3EP60228 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.04■□□□□ 0.96
EIF3EP60228 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
EIF3EP60228 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.04■□□□□ 0.96
EIF3EP60228 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
EIF3EP60228 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.04■□□□□ 0.96
EIF3EP60228 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
EIF3EP60228 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 USP39-204ENST00000409766 2033 ntTSL 2 BASIC21.04■□□□□ 0.96
EIF3EP60228 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC21.04■□□□□ 0.96
EIF3EP60228 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.04■□□□□ 0.96
EIF3EP60228 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
EIF3EP60228 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3EP60228 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3EP60228 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3EP60228 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3EP60228 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.03■□□□□ 0.96
EIF3EP60228 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
EIF3EP60228 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.03■□□□□ 0.96
EIF3EP60228 CD44-222ENST00000526025 1052 ntTSL 2 BASIC21.03■□□□□ 0.96
EIF3EP60228 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3EP60228 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3EP60228 NTF6G-201ENST00000591094 616 ntBASIC21.03■□□□□ 0.96
EIF3EP60228 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
EIF3EP60228 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
EIF3EP60228 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3EP60228 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
EIF3EP60228 AC112907.3-201ENST00000577781 2400 ntBASIC21.03■□□□□ 0.96
EIF3EP60228 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
EIF3EP60228 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
EIF3EP60228 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.02■□□□□ 0.96
EIF3EP60228 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
EIF3EP60228 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
EIF3EP60228 AC099778.1-201ENST00000568593 1911 ntBASIC21.02■□□□□ 0.96
EIF3EP60228 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC21.02■□□□□ 0.96
EIF3EP60228 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 TFG-210ENST00000620299 1289 ntTSL 5 BASIC21.02■□□□□ 0.96
EIF3EP60228 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 MYCNOS-205ENST00000641950 531 ntBASIC21.02■□□□□ 0.96
EIF3EP60228 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
EIF3EP60228 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
EIF3EP60228 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
EIF3EP60228 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
EIF3EP60228 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC21.02■□□□□ 0.95
EIF3EP60228 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.02■□□□□ 0.95
EIF3EP60228 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
EIF3EP60228 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC21.01■□□□□ 0.95
EIF3EP60228 PARP1-202ENST00000366792 553 ntTSL 3 BASIC21.01■□□□□ 0.95
EIF3EP60228 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
EIF3EP60228 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
EIF3EP60228 AC034268.1-201ENST00000441047 882 ntBASIC21.01■□□□□ 0.95
EIF3EP60228 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC21.01■□□□□ 0.95
EIF3EP60228 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms