Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN18P56856 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.28■□□□□ 0.52
CLDN18P56856 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC18.28■□□□□ 0.52
CLDN18P56856 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.28■□□□□ 0.52
CLDN18P56856 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.28■□□□□ 0.52
CLDN18P56856 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN18P56856 AC060766.5-201ENST00000590539 871 ntBASIC18.28■□□□□ 0.52
CLDN18P56856 HLA-B-256ENST00000639848 1089 ntBASIC18.28■□□□□ 0.52
CLDN18P56856 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN18P56856 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN18P56856 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN18P56856 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN18P56856 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN18P56856 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN18P56856 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLDN18P56856 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN18P56856 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN18P56856 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
CLDN18P56856 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN18P56856 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLDN18P56856 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.27■□□□□ 0.52
CLDN18P56856 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.27■□□□□ 0.52
CLDN18P56856 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.27■□□□□ 0.52
CLDN18P56856 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.27■□□□□ 0.52
CLDN18P56856 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.27■□□□□ 0.52
CLDN18P56856 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.27■□□□□ 0.52
CLDN18P56856 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CLDN18P56856 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN18P56856 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN18P56856 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
CLDN18P56856 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN18P56856 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLDN18P56856 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLDN18P56856 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN18P56856 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN18P56856 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN18P56856 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN18P56856 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN18P56856 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLDN18P56856 POU5F1P3-201ENST00000428824 1078 ntBASIC18.26■□□□□ 0.51
CLDN18P56856 FAM201B-201ENST00000458407 597 ntBASIC18.26■□□□□ 0.51
CLDN18P56856 UNC93B5-201ENST00000530315 699 ntBASIC18.26■□□□□ 0.51
CLDN18P56856 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN18P56856 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN18P56856 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.26■□□□□ 0.51
CLDN18P56856 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN18P56856 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
CLDN18P56856 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.26■□□□□ 0.51
CLDN18P56856 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN18P56856 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLDN18P56856 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CLDN18P56856 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CLDN18P56856 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 KRT8P36-201ENST00000489121 1440 ntBASIC18.25■□□□□ 0.51
CLDN18P56856 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.25■□□□□ 0.51
CLDN18P56856 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLDN18P56856 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.25■□□□□ 0.51
CLDN18P56856 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.25■□□□□ 0.51
CLDN18P56856 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN18P56856 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLDN18P56856 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
CLDN18P56856 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CLDN18P56856 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.25■□□□□ 0.51
CLDN18P56856 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CLDN18P56856 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLDN18P56856 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN18P56856 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN18P56856 AC005229.4-201ENST00000610085 2198 ntBASIC18.24■□□□□ 0.51
CLDN18P56856 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN18P56856 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN18P56856 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN18P56856 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN18P56856 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN18P56856 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
CLDN18P56856 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN18P56856 PNMA6B-201ENST00000538162 1200 ntBASIC18.24■□□□□ 0.51
CLDN18P56856 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN18P56856 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CLDN18P56856 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.24■□□□□ 0.51
CLDN18P56856 AC092368.3-202ENST00000574180 1591 ntBASIC18.24■□□□□ 0.51
CLDN18P56856 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.24■□□□□ 0.51
CLDN18P56856 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN18P56856 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.23■□□□□ 0.51
CLDN18P56856 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC18.23■□□□□ 0.51
CLDN18P56856 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN18P56856 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC18.23■□□□□ 0.51
CLDN18P56856 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN18P56856 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CLDN18P56856 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms