Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SH3BGRP55822 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.37■□□□□ 0.69
SH3BGRP55822 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC19.37■□□□□ 0.69
SH3BGRP55822 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.37■□□□□ 0.69
SH3BGRP55822 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SH3BGRP55822 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 SNX3-202ENST00000349379 890 ntTSL 2 BASIC19.37■□□□□ 0.69
SH3BGRP55822 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.37■□□□□ 0.69
SH3BGRP55822 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.37■□□□□ 0.69
SH3BGRP55822 AC027682.1-201ENST00000562846 899 ntBASIC19.37■□□□□ 0.69
SH3BGRP55822 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 AC073314.1-201ENST00000568729 2216 ntBASIC19.37■□□□□ 0.69
SH3BGRP55822 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SH3BGRP55822 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SH3BGRP55822 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SH3BGRP55822 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SH3BGRP55822 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SH3BGRP55822 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SH3BGRP55822 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.36■□□□□ 0.69
SH3BGRP55822 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
SH3BGRP55822 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 MTURN-203ENST00000409688 843 ntTSL 2 BASIC19.36■□□□□ 0.69
SH3BGRP55822 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.36■□□□□ 0.69
SH3BGRP55822 AC068587.7-201ENST00000641602 218 ntBASIC19.36■□□□□ 0.69
SH3BGRP55822 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SH3BGRP55822 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SH3BGRP55822 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.36■□□□□ 0.69
SH3BGRP55822 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.35■□□□□ 0.69
SH3BGRP55822 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.35■□□□□ 0.69
SH3BGRP55822 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SH3BGRP55822 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 MIR638-201ENST00000385237 100 ntBASIC19.35■□□□□ 0.69
SH3BGRP55822 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC19.35■□□□□ 0.69
SH3BGRP55822 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
SH3BGRP55822 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC19.35■□□□□ 0.69
SH3BGRP55822 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 AC233992.3-201ENST00000607491 485 ntBASIC19.35■□□□□ 0.69
SH3BGRP55822 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.35■□□□□ 0.69
SH3BGRP55822 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.35■□□□□ 0.69
SH3BGRP55822 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
SH3BGRP55822 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SH3BGRP55822 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3BGRP55822 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SH3BGRP55822 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3BGRP55822 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3BGRP55822 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.34■□□□□ 0.69
SH3BGRP55822 ME2-206ENST00000638410 2289 ntTSL 5 BASIC19.34■□□□□ 0.69
SH3BGRP55822 ME2-210ENST00000639255 2262 ntTSL 5 BASIC19.34■□□□□ 0.69
SH3BGRP55822 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SH3BGRP55822 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.34■□□□□ 0.69
SH3BGRP55822 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.34■□□□□ 0.69
SH3BGRP55822 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SH3BGRP55822 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3BGRP55822 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.34■□□□□ 0.69
SH3BGRP55822 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3BGRP55822 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.34■□□□□ 0.69
SH3BGRP55822 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SH3BGRP55822 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
SH3BGRP55822 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
SH3BGRP55822 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH3BGRP55822 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH3BGRP55822 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH3BGRP55822 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
SH3BGRP55822 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms