Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H2P55055 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H2P55055 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H2P55055 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
NR1H2P55055 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.26■□□□□ 0.67
NR1H2P55055 MLF2-206ENST00000539187 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H2P55055 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.26■□□□□ 0.67
NR1H2P55055 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC19.26■□□□□ 0.67
NR1H2P55055 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.26■□□□□ 0.67
NR1H2P55055 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC19.26■□□□□ 0.67
NR1H2P55055 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NR1H2P55055 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC19.26■□□□□ 0.67
NR1H2P55055 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
NR1H2P55055 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
NR1H2P55055 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.26■□□□□ 0.67
NR1H2P55055 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.26■□□□□ 0.67
NR1H2P55055 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.25■□□□□ 0.67
NR1H2P55055 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
NR1H2P55055 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H2P55055 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H2P55055 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
NR1H2P55055 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
NR1H2P55055 MIR572-201ENST00000384983 95 ntBASIC19.25■□□□□ 0.67
NR1H2P55055 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.25■□□□□ 0.67
NR1H2P55055 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 AC034268.1-201ENST00000441047 882 ntBASIC19.25■□□□□ 0.67
NR1H2P55055 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H2P55055 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC19.25■□□□□ 0.67
NR1H2P55055 AL354811.1-201ENST00000610286 706 ntBASIC19.25■□□□□ 0.67
NR1H2P55055 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H2P55055 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.25■□□□□ 0.67
NR1H2P55055 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
NR1H2P55055 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.25■□□□□ 0.67
NR1H2P55055 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.24■□□□□ 0.67
NR1H2P55055 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC19.24■□□□□ 0.67
NR1H2P55055 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC19.24■□□□□ 0.67
NR1H2P55055 LAYN-209ENST00000533265 1703 ntTSL 5 BASIC19.24■□□□□ 0.67
NR1H2P55055 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
NR1H2P55055 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
NR1H2P55055 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.24■□□□□ 0.67
NR1H2P55055 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NR1H2P55055 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC19.24■□□□□ 0.67
NR1H2P55055 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.23■□□□□ 0.67
NR1H2P55055 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 DET1-207ENST00000564406 2315 ntTSL 2 BASIC19.23■□□□□ 0.67
NR1H2P55055 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NR1H2P55055 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.23■□□□□ 0.67
NR1H2P55055 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC19.23■□□□□ 0.67
NR1H2P55055 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.23■□□□□ 0.67
NR1H2P55055 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.23■□□□□ 0.67
NR1H2P55055 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.23■□□□□ 0.67
NR1H2P55055 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
NR1H2P55055 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
NR1H2P55055 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NR1H2P55055 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.22■□□□□ 0.67
NR1H2P55055 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.22■□□□□ 0.67
NR1H2P55055 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NR1H2P55055 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
NR1H2P55055 AC027612.3-201ENST00000413684 1047 ntBASIC19.22■□□□□ 0.67
NR1H2P55055 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms