Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
LIMK2P53671 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.58■□□□□ 0.88
LIMK2P53671 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC20.58■□□□□ 0.88
LIMK2P53671 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LIMK2P53671 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LIMK2P53671 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
LIMK2P53671 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIMK2P53671 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIMK2P53671 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIMK2P53671 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIMK2P53671 GPX1P1-201ENST00000388829 606 ntBASIC20.57■□□□□ 0.88
LIMK2P53671 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.57■□□□□ 0.88
LIMK2P53671 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC20.57■□□□□ 0.88
LIMK2P53671 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.57■□□□□ 0.88
LIMK2P53671 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.57■□□□□ 0.88
LIMK2P53671 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.57■□□□□ 0.88
LIMK2P53671 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC20.57■□□□□ 0.88
LIMK2P53671 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIMK2P53671 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LIMK2P53671 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LIMK2P53671 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIMK2P53671 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LIMK2P53671 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIMK2P53671 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIMK2P53671 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.56■□□□□ 0.88
LIMK2P53671 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIMK2P53671 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LIMK2P53671 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC20.56■□□□□ 0.88
LIMK2P53671 AC138907.5-202ENST00000569484 235 ntBASIC20.56■□□□□ 0.88
LIMK2P53671 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.56■□□□□ 0.88
LIMK2P53671 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.56■□□□□ 0.88
LIMK2P53671 MAZ-216ENST00000616501 991 ntTSL 5 BASIC20.56■□□□□ 0.88
LIMK2P53671 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIMK2P53671 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LIMK2P53671 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LIMK2P53671 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LIMK2P53671 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.56■□□□□ 0.88
LIMK2P53671 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.55■□□□□ 0.88
LIMK2P53671 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC20.55■□□□□ 0.88
LIMK2P53671 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIMK2P53671 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.55■□□□□ 0.88
LIMK2P53671 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.55■□□□□ 0.88
LIMK2P53671 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIMK2P53671 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LIMK2P53671 AL162377.1-201ENST00000618844 1793 ntBASIC20.55■□□□□ 0.88
LIMK2P53671 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIMK2P53671 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LIMK2P53671 AL355802.2-201ENST00000402069 882 ntBASIC20.55■□□□□ 0.88
LIMK2P53671 AC007322.1-201ENST00000426983 750 ntBASIC20.55■□□□□ 0.88
LIMK2P53671 AC010141.2-201ENST00000452426 721 ntBASIC20.55■□□□□ 0.88
LIMK2P53671 KRT18P20-201ENST00000548986 1279 ntBASIC20.55■□□□□ 0.88
LIMK2P53671 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC20.55■□□□□ 0.88
LIMK2P53671 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LIMK2P53671 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIMK2P53671 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LIMK2P53671 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.55■□□□□ 0.88
LIMK2P53671 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LIMK2P53671 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.55■□□□□ 0.88
LIMK2P53671 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.55■□□□□ 0.88
LIMK2P53671 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LIMK2P53671 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
LIMK2P53671 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
LIMK2P53671 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
LIMK2P53671 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC20.54■□□□□ 0.88
LIMK2P53671 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.54■□□□□ 0.88
LIMK2P53671 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.54■□□□□ 0.88
LIMK2P53671 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC20.54■□□□□ 0.88
LIMK2P53671 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.54■□□□□ 0.88
LIMK2P53671 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
LIMK2P53671 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 AL512408.1-201ENST00000569378 2000 ntBASIC20.54■□□□□ 0.88
LIMK2P53671 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
LIMK2P53671 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
LIMK2P53671 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LIMK2P53671 KRT16P2-201ENST00000414673 1423 ntBASIC20.53■□□□□ 0.88
LIMK2P53671 AL391422.3-201ENST00000603791 2761 ntBASIC20.53■□□□□ 0.88
LIMK2P53671 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LIMK2P53671 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LIMK2P53671 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.53■□□□□ 0.88
LIMK2P53671 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.53■□□□□ 0.88
LIMK2P53671 AL121832.2-201ENST00000610979 668 ntBASIC20.53■□□□□ 0.88
LIMK2P53671 AL050303.2-201ENST00000619798 666 ntBASIC20.53■□□□□ 0.88
LIMK2P53671 PARP1-210ENST00000629232 477 ntTSL 5 BASIC20.53■□□□□ 0.88
LIMK2P53671 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LIMK2P53671 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LIMK2P53671 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
LIMK2P53671 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.53■□□□□ 0.88
LIMK2P53671 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
LIMK2P53671 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
LIMK2P53671 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms