Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC25A1P53007 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC25A1P53007 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC25A1P53007 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC25A1P53007 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC25A1P53007 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC25A1P53007 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SLC25A1P53007 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SLC25A1P53007 KRT8P36-201ENST00000489121 1440 ntBASIC18.14■□□□□ 0.49
SLC25A1P53007 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.14■□□□□ 0.49
SLC25A1P53007 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC25A1P53007 AFG3L1P-217ENST00000557444 2447 ntBASIC18.13■□□□□ 0.49
SLC25A1P53007 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SLC25A1P53007 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC25A1P53007 SAPCD2P1-201ENST00000395413 1184 ntBASIC18.13■□□□□ 0.49
SLC25A1P53007 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC25A1P53007 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC25A1P53007 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SLC25A1P53007 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC18.13■□□□□ 0.49
SLC25A1P53007 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.13■□□□□ 0.49
SLC25A1P53007 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC18.13■□□□□ 0.49
SLC25A1P53007 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SLC25A1P53007 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.13■□□□□ 0.49
SLC25A1P53007 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC18.12■□□□□ 0.49
SLC25A1P53007 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC25A1P53007 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC25A1P53007 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
SLC25A1P53007 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC25A1P53007 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.12■□□□□ 0.49
SLC25A1P53007 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC25A1P53007 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 KRT18P14-201ENST00000534205 1250 ntBASIC18.12■□□□□ 0.49
SLC25A1P53007 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC25A1P53007 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 AC004854.2-201ENST00000608450 1441 ntBASIC18.12■□□□□ 0.49
SLC25A1P53007 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC25A1P53007 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.12■□□□□ 0.49
SLC25A1P53007 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SLC25A1P53007 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC25A1P53007 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC25A1P53007 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC25A1P53007 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SLC25A1P53007 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC25A1P53007 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC25A1P53007 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC25A1P53007 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC25A1P53007 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC25A1P53007 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC25A1P53007 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC25A1P53007 AC019069.1-201ENST00000610008 1333 ntBASIC18.11■□□□□ 0.49
SLC25A1P53007 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC25A1P53007 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC25A1P53007 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SLC25A1P53007 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC25A1P53007 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SLC25A1P53007 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SLC25A1P53007 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC18.11■□□□□ 0.49
SLC25A1P53007 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
SLC25A1P53007 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.11■□□□□ 0.49
SLC25A1P53007 PCDHAC2-203ENST00000615316 3011 ntBASIC18.11■□□□□ 0.49
SLC25A1P53007 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
SLC25A1P53007 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SLC25A1P53007 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC25A1P53007 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC25A1P53007 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
SLC25A1P53007 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC25A1P53007 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC25A1P53007 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC18.1■□□□□ 0.49
SLC25A1P53007 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC25A1P53007 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC18.1■□□□□ 0.49
SLC25A1P53007 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SLC25A1P53007 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms