Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN2P51788 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN2P51788 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.72■□□□□ 0.75
CLCN2P51788 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CLCN2P51788 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN2P51788 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.72■□□□□ 0.75
CLCN2P51788 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN2P51788 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CLCN2P51788 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN2P51788 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCN2P51788 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.71■□□□□ 0.75
CLCN2P51788 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN2P51788 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN2P51788 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC19.71■□□□□ 0.75
CLCN2P51788 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLCN2P51788 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.71■□□□□ 0.75
CLCN2P51788 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
CLCN2P51788 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 AC087289.5-201ENST00000586076 3175 ntBASIC19.71■□□□□ 0.75
CLCN2P51788 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
CLCN2P51788 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.71■□□□□ 0.75
CLCN2P51788 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CLCN2P51788 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN2P51788 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.7■□□□□ 0.74
CLCN2P51788 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 AC073314.1-201ENST00000568729 2216 ntBASIC19.7■□□□□ 0.74
CLCN2P51788 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCN2P51788 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.7■□□□□ 0.74
CLCN2P51788 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN2P51788 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.7■□□□□ 0.74
CLCN2P51788 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.7■□□□□ 0.74
CLCN2P51788 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
CLCN2P51788 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
CLCN2P51788 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
CLCN2P51788 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.7■□□□□ 0.74
CLCN2P51788 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN2P51788 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLCN2P51788 AC010141.2-201ENST00000452426 721 ntBASIC19.69■□□□□ 0.74
CLCN2P51788 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN2P51788 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC19.69■□□□□ 0.74
CLCN2P51788 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC19.69■□□□□ 0.74
CLCN2P51788 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN2P51788 WWOX-218ENST00000627394 894 ntTSL 5 BASIC19.69■□□□□ 0.74
CLCN2P51788 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
CLCN2P51788 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CLCN2P51788 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
CLCN2P51788 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
CLCN2P51788 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC19.69■□□□□ 0.74
CLCN2P51788 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CLCN2P51788 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
CLCN2P51788 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN2P51788 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN2P51788 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN2P51788 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN2P51788 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC19.68■□□□□ 0.74
CLCN2P51788 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN2P51788 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN2P51788 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN2P51788 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.68■□□□□ 0.74
CLCN2P51788 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.68■□□□□ 0.74
CLCN2P51788 BID-214ENST00000617586 542 ntTSL 5 BASIC19.68■□□□□ 0.74
CLCN2P51788 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN2P51788 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN2P51788 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN2P51788 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
CLCN2P51788 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CLCN2P51788 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.67■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms