Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC19.36■□□□□ 0.69
PRIM2P49643 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PRIM2P49643 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRIM2P49643 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.36■□□□□ 0.69
PRIM2P49643 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRIM2P49643 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
PRIM2P49643 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
PRIM2P49643 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PRIM2P49643 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.35■□□□□ 0.69
PRIM2P49643 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 AC020907.5-201ENST00000624372 1936 ntBASIC19.35■□□□□ 0.69
PRIM2P49643 AC004854.2-201ENST00000608450 1441 ntBASIC19.35■□□□□ 0.69
PRIM2P49643 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PRIM2P49643 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC19.35■□□□□ 0.69
PRIM2P49643 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
PRIM2P49643 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PRIM2P49643 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.35■□□□□ 0.69
PRIM2P49643 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PRIM2P49643 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PRIM2P49643 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PRIM2P49643 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
PRIM2P49643 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.34■□□□□ 0.69
PRIM2P49643 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 KRT19P1-201ENST00000405746 1186 ntBASIC19.34■□□□□ 0.69
PRIM2P49643 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC19.34■□□□□ 0.69
PRIM2P49643 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC19.34■□□□□ 0.69
PRIM2P49643 GALNS-213ENST00000569433 723 ntTSL 3 BASIC19.34■□□□□ 0.69
PRIM2P49643 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC19.34■□□□□ 0.69
PRIM2P49643 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC19.34■□□□□ 0.69
PRIM2P49643 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC19.34■□□□□ 0.69
PRIM2P49643 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
PRIM2P49643 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
PRIM2P49643 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.34■□□□□ 0.69
PRIM2P49643 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRIM2P49643 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRIM2P49643 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC19.33■□□□□ 0.69
PRIM2P49643 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRIM2P49643 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PRIM2P49643 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.33■□□□□ 0.69
PRIM2P49643 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRIM2P49643 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRIM2P49643 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
PRIM2P49643 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRIM2P49643 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC19.33■□□□□ 0.68
PRIM2P49643 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.33■□□□□ 0.68
PRIM2P49643 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.33■□□□□ 0.68
PRIM2P49643 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRIM2P49643 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.33■□□□□ 0.68
PRIM2P49643 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.33■□□□□ 0.68
PRIM2P49643 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC19.33■□□□□ 0.68
PRIM2P49643 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRIM2P49643 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
PRIM2P49643 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PRIM2P49643 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
PRIM2P49643 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
PRIM2P49643 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRIM2P49643 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
PRIM2P49643 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
PRIM2P49643 AC097381.1-201ENST00000429019 1296 ntBASIC19.32■□□□□ 0.68
PRIM2P49643 AC034268.1-201ENST00000441047 882 ntBASIC19.32■□□□□ 0.68
PRIM2P49643 SLC7A5P2-201ENST00000553010 536 ntBASIC19.32■□□□□ 0.68
PRIM2P49643 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRIM2P49643 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRIM2P49643 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
PRIM2P49643 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRIM2P49643 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRIM2P49643 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
PRIM2P49643 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.31■□□□□ 0.68
PRIM2P49643 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC19.31■□□□□ 0.68
PRIM2P49643 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
PRIM2P49643 AC087623.3-201ENST00000607047 1098 ntBASIC19.31■□□□□ 0.68
PRIM2P49643 MIR6821-201ENST00000617625 74 ntBASIC19.31■□□□□ 0.68
PRIM2P49643 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.31■□□□□ 0.68
PRIM2P49643 RARRES2P11-201ENST00000635158 484 ntBASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms