Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL5P42830 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CXCL5P42830 FP700111.2-201ENST00000619190 1892 ntBASIC13.72□□□□□ -0.21
CXCL5P42830 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
CXCL5P42830 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 IGHV3-19-201ENST00000521488 291 ntBASIC13.72□□□□□ -0.21
CXCL5P42830 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL5P42830 AC126544.1-201ENST00000580842 1059 ntBASIC13.72□□□□□ -0.21
CXCL5P42830 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC13.72□□□□□ -0.21
CXCL5P42830 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
CXCL5P42830 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CXCL5P42830 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.72□□□□□ -0.21
CXCL5P42830 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 AC005224.4-201ENST00000583262 1652 ntBASIC13.72□□□□□ -0.21
CXCL5P42830 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
CXCL5P42830 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
CXCL5P42830 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL5P42830 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL5P42830 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL5P42830 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC13.71□□□□□ -0.21
CXCL5P42830 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL5P42830 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL5P42830 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL5P42830 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
CXCL5P42830 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL5P42830 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.21
CXCL5P42830 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL5P42830 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL5P42830 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC13.71□□□□□ -0.21
CXCL5P42830 MFF-208ENST00000409616 1247 ntTSL 5 BASIC13.71□□□□□ -0.21
CXCL5P42830 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC13.71□□□□□ -0.21
CXCL5P42830 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC13.71□□□□□ -0.21
CXCL5P42830 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC13.71□□□□□ -0.21
CXCL5P42830 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL5P42830 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
CXCL5P42830 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
CXCL5P42830 AP004607.4-201ENST00000530158 1459 ntBASIC13.71□□□□□ -0.21
CXCL5P42830 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CXCL5P42830 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
CXCL5P42830 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL5P42830 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL5P42830 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL5P42830 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC13.71□□□□□ -0.22
CXCL5P42830 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CXCL5P42830 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.71□□□□□ -0.22
CXCL5P42830 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
CXCL5P42830 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL5P42830 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CXCL5P42830 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL5P42830 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC13.7□□□□□ -0.22
CXCL5P42830 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL5P42830 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CXCL5P42830 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.7□□□□□ -0.22
CXCL5P42830 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL5P42830 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 AC233992.3-201ENST00000607491 485 ntBASIC13.7□□□□□ -0.22
CXCL5P42830 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 DET1-207ENST00000564406 2315 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL5P42830 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC13.7□□□□□ -0.22
CXCL5P42830 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CXCL5P42830 BX323043.1-201ENST00000641006 1765 ntBASIC13.7□□□□□ -0.22
CXCL5P42830 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CXCL5P42830 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC13.7□□□□□ -0.22
CXCL5P42830 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC13.7□□□□□ -0.22
CXCL5P42830 PODN-203ENST00000395871 2744 ntTSL 5 BASIC13.7□□□□□ -0.22
CXCL5P42830 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CXCL5P42830 BX005040.4-201ENST00000637145 1518 ntBASIC13.69□□□□□ -0.22
CXCL5P42830 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC13.69□□□□□ -0.22
CXCL5P42830 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
CXCL5P42830 AL158211.5-201ENST00000623583 2518 ntBASIC13.69□□□□□ -0.22
CXCL5P42830 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC13.69□□□□□ -0.22
CXCL5P42830 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
CXCL5P42830 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CXCL5P42830 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms