Protein–RNA interactions for Protein: P42695

NCAPD3, Condensin-2 complex subunit D3, humanhuman

Predictions only

Length 1,498 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3P42695 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC36.59■■■■□ 3.45
NCAPD3P42695 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC36.59■■■■□ 3.45
NCAPD3P42695 TREX2-204ENST00000370212 861 ntTSL 5 BASIC36.59■■■■□ 3.45
NCAPD3P42695 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC36.59■■■■□ 3.45
NCAPD3P42695 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC36.59■■■■□ 3.45
NCAPD3P42695 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC36.59■■■■□ 3.45
NCAPD3P42695 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC36.58■■■■□ 3.45
NCAPD3P42695 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC36.58■■■■□ 3.45
NCAPD3P42695 F2R-202ENST00000505600 442 ntTSL 2 BASIC36.58■■■■□ 3.45
NCAPD3P42695 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC36.58■■■■□ 3.45
NCAPD3P42695 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC36.58■■■■□ 3.45
NCAPD3P42695 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC36.58■■■■□ 3.45
NCAPD3P42695 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC36.57■■■■□ 3.45
NCAPD3P42695 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC36.57■■■■□ 3.45
NCAPD3P42695 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC36.57■■■■□ 3.45
NCAPD3P42695 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC36.57■■■■□ 3.45
NCAPD3P42695 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC36.57■■■■□ 3.44
NCAPD3P42695 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC36.57■■■■□ 3.44
NCAPD3P42695 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC36.57■■■■□ 3.44
NCAPD3P42695 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC36.57■■■■□ 3.44
NCAPD3P42695 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
NCAPD3P42695 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC36.56■■■■□ 3.44
NCAPD3P42695 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
NCAPD3P42695 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC36.56■■■■□ 3.44
NCAPD3P42695 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC36.56■■■■□ 3.44
NCAPD3P42695 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
NCAPD3P42695 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC36.56■■■■□ 3.44
NCAPD3P42695 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC36.56■■■■□ 3.44
NCAPD3P42695 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC36.56■■■■□ 3.44
NCAPD3P42695 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC36.56■■■■□ 3.44
NCAPD3P42695 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC36.56■■■■□ 3.44
NCAPD3P42695 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC36.56■■■■□ 3.44
NCAPD3P42695 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC36.56■■■■□ 3.44
NCAPD3P42695 TMA16-209ENST00000513272 803 ntTSL 2 BASIC36.56■■■■□ 3.44
NCAPD3P42695 AC010203.1-204ENST00000548782 407 ntBASIC36.56■■■■□ 3.44
NCAPD3P42695 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC36.56■■■■□ 3.44
NCAPD3P42695 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC36.56■■■■□ 3.44
NCAPD3P42695 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC36.55■■■■□ 3.44
NCAPD3P42695 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
NCAPD3P42695 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
NCAPD3P42695 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC36.55■■■■□ 3.44
NCAPD3P42695 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
NCAPD3P42695 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC36.55■■■■□ 3.44
NCAPD3P42695 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC36.55■■■■□ 3.44
NCAPD3P42695 AC087388.1-201ENST00000571370 1112 ntBASIC36.55■■■■□ 3.44
NCAPD3P42695 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC36.55■■■■□ 3.44
NCAPD3P42695 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC36.55■■■■□ 3.44
NCAPD3P42695 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC36.55■■■■□ 3.44
NCAPD3P42695 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC36.55■■■■□ 3.44
NCAPD3P42695 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC36.54■■■■□ 3.44
NCAPD3P42695 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC36.54■■■■□ 3.44
NCAPD3P42695 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC36.54■■■■□ 3.44
NCAPD3P42695 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC36.54■■■■□ 3.44
NCAPD3P42695 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC36.54■■■■□ 3.44
NCAPD3P42695 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC36.54■■■■□ 3.44
NCAPD3P42695 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC36.54■■■■□ 3.44
NCAPD3P42695 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
NCAPD3P42695 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC36.54■■■■□ 3.44
NCAPD3P42695 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
NCAPD3P42695 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC36.54■■■■□ 3.44
NCAPD3P42695 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC36.54■■■■□ 3.44
NCAPD3P42695 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC36.53■■■■□ 3.44
NCAPD3P42695 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC36.53■■■■□ 3.44
NCAPD3P42695 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
NCAPD3P42695 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC36.53■■■■□ 3.44
NCAPD3P42695 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC36.53■■■■□ 3.44
NCAPD3P42695 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
NCAPD3P42695 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
NCAPD3P42695 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC36.53■■■■□ 3.44
NCAPD3P42695 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC36.53■■■■□ 3.44
NCAPD3P42695 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
NCAPD3P42695 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC36.53■■■■□ 3.44
NCAPD3P42695 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC36.53■■■■□ 3.44
NCAPD3P42695 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
NCAPD3P42695 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
NCAPD3P42695 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
NCAPD3P42695 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC36.52■■■■□ 3.44
NCAPD3P42695 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC36.52■■■■□ 3.44
NCAPD3P42695 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC36.52■■■■□ 3.44
NCAPD3P42695 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
NCAPD3P42695 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC36.52■■■■□ 3.44
NCAPD3P42695 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC36.52■■■■□ 3.44
NCAPD3P42695 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC36.52■■■■□ 3.44
NCAPD3P42695 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC36.52■■■■□ 3.44
NCAPD3P42695 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC36.51■■■■□ 3.44
NCAPD3P42695 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC36.51■■■■□ 3.44
NCAPD3P42695 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC36.51■■■■□ 3.44
NCAPD3P42695 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC36.51■■■■□ 3.44
NCAPD3P42695 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC36.51■■■■□ 3.44
NCAPD3P42695 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC36.51■■■■□ 3.44
NCAPD3P42695 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC36.51■■■■□ 3.44
NCAPD3P42695 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC36.51■■■■□ 3.43
NCAPD3P42695 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC36.51■■■■□ 3.43
NCAPD3P42695 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC36.51■■■■□ 3.43
NCAPD3P42695 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC36.5■■■■□ 3.43
NCAPD3P42695 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC36.5■■■■□ 3.43
NCAPD3P42695 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC36.5■■■■□ 3.43
NCAPD3P42695 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC36.5■■■■□ 3.43
NCAPD3P42695 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC36.5■■■■□ 3.43
NCAPD3P42695 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC36.5■■■■□ 3.43
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms