Protein–RNA interactions for Protein: P42261

GRIA1, Glutamate receptor 1, humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1P42261 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GRIA1P42261 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.71■□□□□ 0.91
GRIA1P42261 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.71■□□□□ 0.91
GRIA1P42261 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GRIA1P42261 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GRIA1P42261 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.71■□□□□ 0.91
GRIA1P42261 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC20.71■□□□□ 0.91
GRIA1P42261 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.71■□□□□ 0.91
GRIA1P42261 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
GRIA1P42261 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC20.71■□□□□ 0.91
GRIA1P42261 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
GRIA1P42261 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
GRIA1P42261 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
GRIA1P42261 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC20.7■□□□□ 0.91
GRIA1P42261 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC20.7■□□□□ 0.91
GRIA1P42261 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
GRIA1P42261 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.7■□□□□ 0.9
GRIA1P42261 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC20.7■□□□□ 0.9
GRIA1P42261 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
GRIA1P42261 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.7■□□□□ 0.9
GRIA1P42261 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.7■□□□□ 0.9
GRIA1P42261 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.7■□□□□ 0.9
GRIA1P42261 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.7■□□□□ 0.9
GRIA1P42261 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
GRIA1P42261 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
GRIA1P42261 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.7■□□□□ 0.9
GRIA1P42261 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GRIA1P42261 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
GRIA1P42261 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GRIA1P42261 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.69■□□□□ 0.9
GRIA1P42261 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.69■□□□□ 0.9
GRIA1P42261 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.69■□□□□ 0.9
GRIA1P42261 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.69■□□□□ 0.9
GRIA1P42261 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.69■□□□□ 0.9
GRIA1P42261 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GRIA1P42261 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GRIA1P42261 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GRIA1P42261 SMG8-203ENST00000578922 2178 ntBASIC20.69■□□□□ 0.9
GRIA1P42261 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
GRIA1P42261 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
GRIA1P42261 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GRIA1P42261 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.68■□□□□ 0.9
GRIA1P42261 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GRIA1P42261 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
GRIA1P42261 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
GRIA1P42261 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.68■□□□□ 0.9
GRIA1P42261 AC007322.3-201ENST00000426526 701 ntBASIC20.68■□□□□ 0.9
GRIA1P42261 AC026271.2-201ENST00000428091 497 ntBASIC20.68■□□□□ 0.9
GRIA1P42261 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.68■□□□□ 0.9
GRIA1P42261 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.68■□□□□ 0.9
GRIA1P42261 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.68■□□□□ 0.9
GRIA1P42261 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.68■□□□□ 0.9
GRIA1P42261 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC20.68■□□□□ 0.9
GRIA1P42261 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GRIA1P42261 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GRIA1P42261 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GRIA1P42261 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
GRIA1P42261 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
GRIA1P42261 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIA1P42261 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.67■□□□□ 0.9
GRIA1P42261 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
GRIA1P42261 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 KRT18P5-201ENST00000436075 1291 ntBASIC20.67■□□□□ 0.9
GRIA1P42261 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.67■□□□□ 0.9
GRIA1P42261 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 BRI3-207ENST00000539286 699 ntTSL 2 BASIC20.67■□□□□ 0.9
GRIA1P42261 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIA1P42261 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.67■□□□□ 0.9
GRIA1P42261 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIA1P42261 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC20.67■□□□□ 0.9
GRIA1P42261 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.67■□□□□ 0.9
GRIA1P42261 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.67■□□□□ 0.9
GRIA1P42261 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
GRIA1P42261 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.67■□□□□ 0.9
GRIA1P42261 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIA1P42261 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.67■□□□□ 0.9
GRIA1P42261 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
GRIA1P42261 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
GRIA1P42261 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
GRIA1P42261 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
GRIA1P42261 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
GRIA1P42261 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
GRIA1P42261 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.66■□□□□ 0.9
GRIA1P42261 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.66■□□□□ 0.9
GRIA1P42261 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms