Protein–RNA interactions for Protein: P40089

LSM5, U6 snRNA-associated Sm-like protein LSm5, yeastyeast

Known RBP Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM5P40089 AYR1YIL124W 894 nt2.27□□□□□ -2.05
LSM5P40089 MSL1YIR009W 336 nt2.27□□□□□ -2.05
LSM5P40089 AIM32YML050W 936 nt2.27□□□□□ -2.05
LSM5P40089 SAS2YMR127C 1017 nt2.27□□□□□ -2.05
LSM5P40089 LSM7YNL147W 348 nt2.27□□□□□ -2.05
LSM5P40089 PHO80YOL001W 882 nt2.27□□□□□ -2.05
LSM5P40089 ATP3YBR039W 936 nt2.27□□□□□ -2.05
LSM5P40089 MEI5YPL121C 669 nt2.27□□□□□ -2.05
LSM5P40089 APL5YPL195W 2799 nt2.27□□□□□ -2.05
LSM5P40089 CDC60YPL160W 3273 nt2.27□□□□□ -2.05
LSM5P40089 YDL016CYDL016C 303 nt2.26□□□□□ -2.05
LSM5P40089 YJL127C-BYJL127C-B 159 nt2.26□□□□□ -2.05
LSM5P40089 YLR031WYLR031W 561 nt2.26□□□□□ -2.05
LSM5P40089 UBX4YMR067C 1251 nt2.26□□□□□ -2.05
LSM5P40089 ICY1YMR195W 384 nt2.26□□□□□ -2.05
LSM5P40089 SVS1YPL163C 783 nt2.26□□□□□ -2.05
LSM5P40089 YPR172WYPR172W 603 nt2.26□□□□□ -2.05
LSM5P40089 MPH1YIR002C 2982 nt2.26□□□□□ -2.05
LSM5P40089 YPR097WYPR097W 3222 nt2.26□□□□□ -2.05
LSM5P40089 IST2YBR086C 2841 nt2.25□□□□□ -2.05
LSM5P40089 YDL068WYDL068W 330 nt2.25□□□□□ -2.05
LSM5P40089 BUD19YJL188C 309 nt2.25□□□□□ -2.05
LSM5P40089 YJR140W-AYJR140W-A 150 nt2.25□□□□□ -2.05
LSM5P40089 YJR141WYJR141W 1044 nt2.25□□□□□ -2.05
LSM5P40089 RPS7BYNL096C 573 nt2.25□□□□□ -2.05
LSM5P40089 VPS13YLL040C 9435 nt2.25□□□□□ -2.05
LSM5P40089 CDC53YDL132W 2448 nt2.25□□□□□ -2.05
LSM5P40089 CRM1YGR218W 3255 nt2.24□□□□□ -2.05
LSM5P40089 NAN1YPL126W 2691 nt2.24□□□□□ -2.05
LSM5P40089 CIC1YHR052W 1131 nt2.24□□□□□ -2.05
LSM5P40089 YHR180W-AYHR180W-A 183 nt2.24□□□□□ -2.05
LSM5P40089 APQ13YJL075C 417 nt2.24□□□□□ -2.05
LSM5P40089 TIM8YJR135W-A 264 nt2.24□□□□□ -2.05
LSM5P40089 YKL111CYKL111C 336 nt2.24□□□□□ -2.05
LSM5P40089 YOR333CYOR333C 417 nt2.24□□□□□ -2.05
LSM5P40089 RPB5YBR154C 648 nt2.24□□□□□ -2.05
LSM5P40089 SCD5YOR329C 2619 nt2.24□□□□□ -2.05
LSM5P40089 BNI1YNL271C 5862 nt2.24□□□□□ -2.05
LSM5P40089 SAP185YJL098W 3177 nt2.23□□□□□ -2.05
LSM5P40089 BFA1YJR053W 1725 nt2.23□□□□□ -2.05
LSM5P40089 VTC1YER072W 390 nt2.23□□□□□ -2.05
LSM5P40089 GET1YGL020C 708 nt2.23□□□□□ -2.05
LSM5P40089 NOP10YHR072W-A 177 nt2.23□□□□□ -2.05
LSM5P40089 RCN2YOR220W 798 nt2.23□□□□□ -2.05
LSM5P40089 MET18YIL128W 3099 nt2.23□□□□□ -2.05
LSM5P40089 SPC72YAL047C 1869 nt2.22□□□□□ -2.05
LSM5P40089 NUP170YBL079W 4509 nt2.22□□□□□ -2.05
LSM5P40089 MNE1YOR350C 1992 nt2.22□□□□□ -2.05
LSM5P40089 YKL165C-AYKL165C-A 234 nt2.22□□□□□ -2.05
LSM5P40089 DGK1YOR311C 873 nt2.22□□□□□ -2.05
LSM5P40089 ATP15YPL271W 189 nt2.22□□□□□ -2.05
LSM5P40089 DAD3YBR233W-A 285 nt2.22□□□□□ -2.05
LSM5P40089 SLN1YIL147C 3663 nt2.22□□□□□ -2.05
LSM5P40089 SMB1YER029C 591 nt2.21□□□□□ -2.06
LSM5P40089 EAF6YJR082C 342 nt2.21□□□□□ -2.06
LSM5P40089 STE18YJR086W 333 nt2.21□□□□□ -2.06
LSM5P40089 YKL044WYKL044W 321 nt2.21□□□□□ -2.06
LSM5P40089 GRX8YLR364W 330 nt2.21□□□□□ -2.06
LSM5P40089 YJL016WYJL016W 1686 nt2.21□□□□□ -2.06
LSM5P40089 RUD3YOR216C 1455 nt2.2□□□□□ -2.06
LSM5P40089 PET309YLR067C 2898 nt2.2□□□□□ -2.06
LSM5P40089 NUP82YJL061W 2142 nt2.2□□□□□ -2.06
LSM5P40089 IPT1YDR072C 1584 nt2.2□□□□□ -2.06
LSM5P40089 HER1YOR227W 3741 nt2.2□□□□□ -2.06
LSM5P40089 YEL057CYEL057C 702 nt2.2□□□□□ -2.06
LSM5P40089 RPS24AYER074W 408 nt2.2□□□□□ -2.06
LSM5P40089 VOA1YGR106C 798 nt2.2□□□□□ -2.06
LSM5P40089 PEX4YGR133W 552 nt2.2□□□□□ -2.06
LSM5P40089 GIC1YHR061C 945 nt2.2□□□□□ -2.06
LSM5P40089 ATP7YKL016C 525 nt2.2□□□□□ -2.06
LSM5P40089 VPS8YAL002W 3825 nt2.2□□□□□ -2.06
LSM5P40089 YKR075W-AYKR075W-A 270 nt2.19□□□□□ -2.06
LSM5P40089 YOR283WYOR283W 693 nt2.19□□□□□ -2.06
LSM5P40089 ROX1YPR065W 1107 nt2.19□□□□□ -2.06
LSM5P40089 VMA9YCL005W-A 222 nt2.19□□□□□ -2.06
LSM5P40089 SNX41YDR425W 1878 nt2.19□□□□□ -2.06
LSM5P40089 RIC1YLR039C 3171 nt2.19□□□□□ -2.06
LSM5P40089 TOF1YNL273W 3717 nt2.19□□□□□ -2.06
LSM5P40089 SNU56YDR240C 1479 nt2.19□□□□□ -2.06
LSM5P40089 SMD1YGR074W 441 nt2.18□□□□□ -2.06
LSM5P40089 YOL098CYOL098C 3114 nt2.18□□□□□ -2.06
LSM5P40089 YPS5YGL259W 498 nt2.17□□□□□ -2.06
LSM5P40089 NOP15YNL110C 663 nt2.17□□□□□ -2.06
LSM5P40089 SNC2YOR327C 348 nt2.17□□□□□ -2.06
LSM5P40089 RTT107YHR154W 3213 nt2.17□□□□□ -2.06
LSM5P40089 NAM7YMR080C 2916 nt2.16□□□□□ -2.06
LSM5P40089 TUS1YLR425W 3924 nt2.16□□□□□ -2.06
LSM5P40089 tT(UGU)Q1tT(UGU)Q1 76 nt2.16□□□□□ -2.06
LSM5P40089 RMP1YLR145W 606 nt2.16□□□□□ -2.06
LSM5P40089 SEN15YMR059W 387 nt2.16□□□□□ -2.06
LSM5P40089 COS111YBR203W 2775 nt2.16□□□□□ -2.06
LSM5P40089 YDR341CYDR341C 1824 nt2.15□□□□□ -2.06
LSM5P40089 STB4YMR019W 2850 nt2.15□□□□□ -2.07
LSM5P40089 GRR1YJR090C 3456 nt2.15□□□□□ -2.07
LSM5P40089 IRC8YJL051W 2469 nt2.15□□□□□ -2.07
LSM5P40089 SSD1YDR293C 3753 nt2.15□□□□□ -2.07
LSM5P40089 SAP190YKR028W 3102 nt2.15□□□□□ -2.07
LSM5P40089 YBR012W-AYBR012W-A 1323 nt2.15□□□□□ -2.07
LSM5P40089 YOR142W-AYOR142W-A 1323 nt2.15□□□□□ -2.07
LSM5P40089 YPR158W-AYPR158W-A 1323 nt2.15□□□□□ -2.07
Retrieved 100 of 7,029 protein–RNA pairs in 21.1 ms