Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RORAP35398 AP003097.1-201ENST00000530657 1135 ntBASIC19.41■□□□□ 0.7
RORAP35398 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC19.41■□□□□ 0.7
RORAP35398 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RORAP35398 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.41■□□□□ 0.7
RORAP35398 NXN-202ENST00000537628 1340 ntTSL 3 BASIC19.41■□□□□ 0.7
RORAP35398 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RORAP35398 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RORAP35398 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
RORAP35398 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RORAP35398 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RORAP35398 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RORAP35398 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
RORAP35398 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RORAP35398 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC19.4■□□□□ 0.7
RORAP35398 AC098590.1-201ENST00000468126 897 ntBASIC19.4■□□□□ 0.7
RORAP35398 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.4■□□□□ 0.7
RORAP35398 AC006058.3-201ENST00000606217 1069 ntBASIC19.4■□□□□ 0.7
RORAP35398 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RORAP35398 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RORAP35398 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC19.4■□□□□ 0.7
RORAP35398 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
RORAP35398 AC087633.2-202ENST00000565166 1439 ntBASIC19.4■□□□□ 0.7
RORAP35398 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.4■□□□□ 0.7
RORAP35398 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC19.39■□□□□ 0.7
RORAP35398 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.7
RORAP35398 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RORAP35398 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC19.39■□□□□ 0.69
RORAP35398 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RORAP35398 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.39■□□□□ 0.69
RORAP35398 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
RORAP35398 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RORAP35398 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.39■□□□□ 0.69
RORAP35398 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RORAP35398 IRX5-204ENST00000560154 879 ntTSL 5 BASIC19.39■□□□□ 0.69
RORAP35398 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
RORAP35398 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RORAP35398 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RORAP35398 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC19.39■□□□□ 0.69
RORAP35398 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC19.39■□□□□ 0.69
RORAP35398 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.39■□□□□ 0.69
RORAP35398 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RORAP35398 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RORAP35398 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RORAP35398 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RORAP35398 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
RORAP35398 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RORAP35398 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
RORAP35398 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.38■□□□□ 0.69
RORAP35398 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RORAP35398 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RORAP35398 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
RORAP35398 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RORAP35398 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.38■□□□□ 0.69
RORAP35398 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RORAP35398 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RORAP35398 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.38■□□□□ 0.69
RORAP35398 AC128676.1-201ENST00000454392 318 ntBASIC19.38■□□□□ 0.69
RORAP35398 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RORAP35398 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.38■□□□□ 0.69
RORAP35398 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
RORAP35398 AC008403.3-201ENST00000598924 454 ntBASIC19.38■□□□□ 0.69
RORAP35398 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
RORAP35398 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RORAP35398 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
RORAP35398 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RORAP35398 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC19.37■□□□□ 0.69
RORAP35398 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
RORAP35398 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.37■□□□□ 0.69
RORAP35398 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.37■□□□□ 0.69
RORAP35398 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 PNMA6B-201ENST00000538162 1200 ntBASIC19.37■□□□□ 0.69
RORAP35398 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.37■□□□□ 0.69
RORAP35398 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.37■□□□□ 0.69
RORAP35398 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
RORAP35398 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.37■□□□□ 0.69
RORAP35398 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.37■□□□□ 0.69
RORAP35398 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
RORAP35398 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
RORAP35398 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.36■□□□□ 0.69
RORAP35398 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
RORAP35398 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
RORAP35398 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RORAP35398 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
RORAP35398 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
RORAP35398 GCSHP5-201ENST00000443090 522 ntBASIC19.36■□□□□ 0.69
RORAP35398 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
RORAP35398 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC19.36■□□□□ 0.69
RORAP35398 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms