Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 AL121956.5-201ENST00000625261 221 ntBASIC27.16■■□□□ 1.94
RXRBP28702 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
RXRBP28702 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC27.16■■□□□ 1.94
RXRBP28702 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC27.16■■□□□ 1.94
RXRBP28702 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
RXRBP28702 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
RXRBP28702 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
RXRBP28702 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC27.16■■□□□ 1.94
RXRBP28702 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC27.16■■□□□ 1.94
RXRBP28702 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RXRBP28702 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RXRBP28702 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC27.15■■□□□ 1.94
RXRBP28702 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RXRBP28702 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
RXRBP28702 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
RXRBP28702 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC27.15■■□□□ 1.94
RXRBP28702 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC27.15■■□□□ 1.94
RXRBP28702 AC004264.1-201ENST00000608354 794 ntBASIC27.15■■□□□ 1.94
RXRBP28702 IRF5-214ENST00000613821 595 ntTSL 5 BASIC27.15■■□□□ 1.94
RXRBP28702 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC27.15■■□□□ 1.94
RXRBP28702 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
RXRBP28702 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC27.15■■□□□ 1.94
RXRBP28702 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RXRBP28702 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RXRBP28702 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
RXRBP28702 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC27.14■■□□□ 1.94
RXRBP28702 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RXRBP28702 FAM207BP-201ENST00000447172 505 ntBASIC27.14■■□□□ 1.94
RXRBP28702 KLK8-205ENST00000593490 267 ntTSL 3 BASIC27.14■■□□□ 1.94
RXRBP28702 AC139887.4-201ENST00000607877 719 ntBASIC27.14■■□□□ 1.94
RXRBP28702 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC27.14■■□□□ 1.94
RXRBP28702 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
RXRBP28702 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC27.14■■□□□ 1.93
RXRBP28702 AC003102.1-202ENST00000563394 1796 ntBASIC27.14■■□□□ 1.93
RXRBP28702 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC27.14■■□□□ 1.93
RXRBP28702 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RXRBP28702 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
RXRBP28702 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RXRBP28702 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC27.13■■□□□ 1.93
RXRBP28702 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
RXRBP28702 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RXRBP28702 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
RXRBP28702 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC27.13■■□□□ 1.93
RXRBP28702 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC27.13■■□□□ 1.93
RXRBP28702 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC27.13■■□□□ 1.93
RXRBP28702 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC27.12■■□□□ 1.93
RXRBP28702 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RXRBP28702 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC27.12■■□□□ 1.93
RXRBP28702 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RXRBP28702 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
RXRBP28702 KSR1P1-201ENST00000446298 240 ntBASIC27.12■■□□□ 1.93
RXRBP28702 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC27.12■■□□□ 1.93
RXRBP28702 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
RXRBP28702 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC27.12■■□□□ 1.93
RXRBP28702 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC27.12■■□□□ 1.93
RXRBP28702 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC27.12■■□□□ 1.93
RXRBP28702 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RXRBP28702 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
RXRBP28702 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC27.11■■□□□ 1.93
RXRBP28702 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
RXRBP28702 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC27.11■■□□□ 1.93
RXRBP28702 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC27.11■■□□□ 1.93
RXRBP28702 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
RXRBP28702 GRAMD4P8-201ENST00000605465 1115 ntBASIC27.11■■□□□ 1.93
RXRBP28702 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC27.11■■□□□ 1.93
RXRBP28702 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC27.11■■□□□ 1.93
RXRBP28702 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC27.11■■□□□ 1.93
RXRBP28702 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RXRBP28702 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
RXRBP28702 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RXRBP28702 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.1■■□□□ 1.93
RXRBP28702 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RXRBP28702 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC27.1■■□□□ 1.93
RXRBP28702 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC27.1■■□□□ 1.93
RXRBP28702 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC27.1■■□□□ 1.93
RXRBP28702 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC27.1■■□□□ 1.93
RXRBP28702 TSPY5P-201ENST00000426936 936 ntBASIC27.1■■□□□ 1.93
RXRBP28702 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC27.1■■□□□ 1.93
RXRBP28702 FDX1P1-201ENST00000449115 551 ntBASIC27.1■■□□□ 1.93
RXRBP28702 AC092647.4-201ENST00000457211 535 ntBASIC27.1■■□□□ 1.93
RXRBP28702 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC27.1■■□□□ 1.93
RXRBP28702 KRT18P16-201ENST00000510337 1294 ntBASIC27.1■■□□□ 1.93
RXRBP28702 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC27.1■■□□□ 1.93
RXRBP28702 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC27.1■■□□□ 1.93
RXRBP28702 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC27.1■■□□□ 1.93
RXRBP28702 AC004263.2-201ENST00000617183 678 ntBASIC27.1■■□□□ 1.93
RXRBP28702 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC27.1■■□□□ 1.93
RXRBP28702 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC27.1■■□□□ 1.93
RXRBP28702 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC27.1■■□□□ 1.93
RXRBP28702 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RXRBP28702 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RXRBP28702 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RXRBP28702 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC27.09■■□□□ 1.93
RXRBP28702 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC27.09■■□□□ 1.93
RXRBP28702 AC004812.2-201ENST00000611079 2094 ntBASIC27.09■■□□□ 1.93
RXRBP28702 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC27.09■■□□□ 1.93
RXRBP28702 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
RXRBP28702 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC27.09■■□□□ 1.93
RXRBP28702 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC27.09■■□□□ 1.93
RXRBP28702 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC27.09■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms