Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 NEFHP1-201ENST00000412845 2629 ntBASIC16.31■□□□□ 0.2
ATP6V0CP27449 AC120498.9-201ENST00000339021 3867 ntBASIC16.31■□□□□ 0.2
ATP6V0CP27449 TSPY13P-201ENST00000338964 914 ntBASIC16.31■□□□□ 0.2
ATP6V0CP27449 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 EXOG-217ENST00000630638 197 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ATP6V0CP27449 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.31■□□□□ 0.2
ATP6V0CP27449 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 BX005040.4-201ENST00000637145 1518 ntBASIC16.3■□□□□ 0.2
ATP6V0CP27449 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 LETM1P2-201ENST00000597330 2178 ntBASIC16.3■□□□□ 0.2
ATP6V0CP27449 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ATP6V0CP27449 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ATP6V0CP27449 POLI-202ENST00000406285 2030 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 AC010525.1-201ENST00000585559 441 ntBASIC16.29■□□□□ 0.2
ATP6V0CP27449 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.29■□□□□ 0.2
ATP6V0CP27449 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC16.29■□□□□ 0.2
ATP6V0CP27449 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ATP6V0CP27449 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 GUK1-208ENST00000366728 842 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 ABHD17AP5-201ENST00000580133 923 ntBASIC16.28■□□□□ 0.2
ATP6V0CP27449 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 AC093503.3-201ENST00000624917 2352 ntBASIC16.28■□□□□ 0.2
ATP6V0CP27449 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
ATP6V0CP27449 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
ATP6V0CP27449 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms